Parental gene:

NSA2, ENSAMEG00000000593

Aliases:None
Description:NSA2 ribosome biogenesis homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30728]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192524.1:948029..953452(+)


>ENSAMEG00000000593
CCACAAAATGAATATATTGAGTTACACCGGAAGCGCTGTGGCTATCGTTTGGATTACCATGAGAAAAAAAGAAAGAAAGA
AGGTCGAGAGGCTCATGAACGTTCAAAGAAGGCAAAAAAGATGATTGGTCTGAAAGCTAAGCTCTACCATAAACAGCGCC
ATGCTGAGAAAATACAAATGAAAAAGACTATCAAGATGCATGAAAAGAGAAACACCAAACAAAAGAATGATGAAAAGACT
CCACAAGGTGCAGTACCTGCGTATCTACTAGACAGAGAAGGACAGTCCCGAGCTAAAGTACTTTCCAACATGATTAAACA
AAAACGAAAAGAGAAAGCGGGAAAATGGGAAGTTCCTTTACCCAAAGTTCGTGCCCAGGGAGAAACAGAAGTATTAAAAG
TTATTCGAACAGGAAAGAGAAAGAAGAAAGCATGGAAGAGGATGGTCACTAAAGTCTGCTTTGTTGGAGACGGCTTTACT
CGAAAACCACCTAAATATGAAAGATTCATTAGGCCAATGGGCTTACGTTTCAAAAAGGCCCACGTAACACATCCTGAATT
GAAAGCCACCTTTTGCCTGCCAATACTTGGTGTCAAAAAGAATCCTTCATCCCCACTATATACAACTTTGGGTGTTATTA
CCAAAGGTACTGTAATTGAGGTGAACGTGAGTGAGTTGGGCCTTGTGACACAAGGAGGCAAAGTTATTTGGGGAAAATAT
GCTCAGGTTACGAACAATCCTGAAAATGATGGATGCATAAATGCAGTCCTGCTGGTTTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008311 ortholog_one2many 4 retrogenes
retro_cfam_1292, retro_cfam_361, retro_cfam_49, retro_cfam_64,
Callithrix jacchus ENSCJAG00000016874 possible_ortholog 1 retrogene
retro_cjac_116,
Echinops telfairi ENSETEG00000004095 possible_ortholog 13 retrogenes
retro_etel_1086, retro_etel_1479, retro_etel_1786, retro_etel_2030, retro_etel_2112, retro_etel_2116, retro_etel_2197, retro_etel_359, retro_etel_613, retro_etel_729, retro_etel_890, retro_etel_940, retro_etel_988,
Felis catus ENSFCAG00000011978 possible_ortholog 1 retrogene
retro_fcat_98,
Loxodonta africana ENSLAFG00000009910 possible_ortholog 4 retrogenes
retro_lafr_253, retro_lafr_455, retro_lafr_620, retro_lafr_714,
Macropus eugenii ENSMEUG00000015798 possible_ortholog 3 retrogenes
retro_meug_1191, retro_meug_1408, retro_meug_161,
Monodelphis domestica ENSMODG00000001900 possible_ortholog 4 retrogenes
retro_mdom_115, retro_mdom_1702, retro_mdom_581, retro_mdom_592,
Mustela putorius furo ENSMPUG00000005795 ortholog_one2one 5 retrogenes
retro_mputfur_153, retro_mputfur_250, retro_mputfur_510, retro_mputfur_573, retro_mputfur_690,
Oryctolagus cuniculus ENSOCUG00000006536 possible_ortholog 6 retrogenes
retro_ocun_149, retro_ocun_1591, retro_ocun_1602, retro_ocun_306, retro_ocun_658, retro_ocun_76,
Rattus norvegicus ENSRNOG00000016530 possible_ortholog 15 retrogenes
retro_rnor_1074, retro_rnor_1317, retro_rnor_1366, retro_rnor_1921, retro_rnor_2630, retro_rnor_2745, retro_rnor_2767, retro_rnor_2817, retro_rnor_2820, retro_rnor_2852, retro_rnor_2877, retro_rnor_2964, retro_rnor_618, retro_rnor_945, retro_rnor_951,
Sorex araneus ENSSARG00000009424 possible_ortholog 4 retrogenes
retro_sara_555, retro_sara_589, retro_sara_620, retro_sara_703,
Tupaia belangeri ENSTBEG00000012978 possible_ortholog 56 retrogenes
retro_tbel_1062, retro_tbel_1078, retro_tbel_1141, retro_tbel_1317, retro_tbel_1329, retro_tbel_1476, retro_tbel_152, retro_tbel_1548, retro_tbel_1569, retro_tbel_1627, retro_tbel_1733, retro_tbel_1762, retro_tbel_1778, retro_tbel_179, retro_tbel_1845, retro_tbel_1940, retro_tbel_2102, retro_tbel_2113, retro_tbel_2138, retro_tbel_2220, retro_tbel_229, retro_tbel_254, retro_tbel_2586, retro_tbel_2757, retro_tbel_2784, retro_tbel_3016, retro_tbel_3040, retro_tbel_3116, retro_tbel_3264, retro_tbel_3298, retro_tbel_3417, retro_tbel_3514, retro_tbel_3601, retro_tbel_3650, retro_tbel_3724, retro_tbel_3736, retro_tbel_3763, retro_tbel_3795, retro_tbel_4028, retro_tbel_406, retro_tbel_4104, retro_tbel_4169, retro_tbel_4270, retro_tbel_430, retro_tbel_4401, retro_tbel_4422, retro_tbel_4491, retro_tbel_4503, retro_tbel_4513, retro_tbel_4642, retro_tbel_4689, retro_tbel_535, retro_tbel_670, retro_tbel_721, retro_tbel_897, retro_tbel_91,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_151 71.86 100.00
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2. retro_amel_180 83.49 81.47
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3. retro_amel_734 79.45 55.98
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4. retro_amel_1635 66.91 51.35
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5. retro_amel_1729 72.67 65.64
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Download FASTA sequences of all ENSAMEG00000000593 retrocopies