Parental gene:

SUCLA2, ENSACAG00000014610

Aliases:None
Description:succinate-CoA ligase, ADP-forming, beta subunit [Source:HGNC Symbol;Acc:11448]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:1:136997506..137023480(+)


>ENSACAG00000014610
ATGGAGGGCCCGTGTTGTGGCATGCGTCGGCGCATGCGTATTGCGAGCGGGGCAAACTTGCCTGAGCCGAAGGGCCGGGG
AGGAAGGAGGCTTGTCATGGCCGCCTCCATGATGTGTTCGCGGGTGGTGACAGCGGCCGCCAGGCAGCTGAGGGGATATC
AAGGAGGGCGCGCGAGCCTCGCGGCCAAGATTCTCAGTGGAAGTCCTGGTTTGCTTAGCAATCATGCATTTCAAATTGAG
CAGCGAAGGAACTTGTCATTGCATGAATATCTGAGTATGGAACTACTGAAAGAAGCTGGAATTTCTGTTCCACATGGATT
AGTTGCAAATACACCAGAGGACGCTTATAACGTTGCCAAACAAATAGGTACAAAAGACCTTGTTGTGAAGGCACAAGTTT
TAGCTGGTGGCAGAGGAAAAGGAACATTTGAAGGTGGTCTAAAAGGAGGAGTGAAAATAGTCTTTTCTCCAGAAGAAGCA
CGAGAGATTTCCTCAAGAATGATTGGGAAAAAGCTATTCACAAAGCAGACGGGAGAAAAGGGCAGGATATGCAATCAAGT
ATTTATCTGTGAGCGCAGATATCCCAGAAGAGAGTACTATTTTGCAATAACCATGGAACGATCATTTCAGGGCCCTGTAC
TCATTGGCAGCGCTCAAGGTGGTGTCAATATTGAAGATGTGGCTGCAGAGAATCCTGATGCTATTGCCAAGGAACCAGTT
GACATTGTGGAAGGCATCCAGAAGGAACAAGCTATCAGGCTGGCCAAGAAAATGGGATTTCCTGCTAATTTAGTAAATGA
AGCAGCTGAAAATATGATTAAGATCTACAACCTCTTTATTAAATTTGATGCCACAATGGTAGAAATTAACCCCATGGTTG
AAGATTCCACAGGGATTGTGATGTGTATGGACGCAAAGATAAACTTTGATAGCAATTCAGCTTATCGTCAGCAGAAAATC
TTCAGCTTGCAAGACTGGACCCAAGAAGATGACAGAGACAGGGATGCAGCAAAGTCTGATCTTAATTATATAGGATTAGA
TGGCAGCATTGGATGTCTGGTAAATGGTGCTGGTCTTGCAATGGCCACCATGGATATAATTAAACTTCATGGAGGCACTC
CAGCAAATTTTCTTGATGTCGGTGGTGGTGCTACAGCGCAGCGGGTGACTGAGGCCTTTAGACTTATTACTTCAGATAAA
AAGGTGCAGGCAATTTTGGTAAATATTTTTGGAGGCATTATGCGGTGTGATGTGATTGCACAAGGTATAATCATGGCAGT
AAAAGATTTGGAACTAAAAATACCTATTGTTGTACGGTTACAAGGTACACGAGTTGATGATGCCAAAGCTTTAATAACAG
ACAGTGGTCTGAAAATACTTGCTTGTGATGATTTGGATGAAGCTGCTAAAATGGTTGTGAAACTCTCTGAAATAGTGACC
TTAGCAAAGCAGGCGCAAGTGGATGTTAAGTTTCAGTTACCAATCTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 84 .75 RPM
SRP009831_brain 130 .52 RPM
SRP009831_dewlap 27 .59 RPM
SRP009831_embryo 98 .07 RPM
SRP009831_heart 217 .02 RPM
SRP009831_liver 55 .10 RPM
SRP009831_lung 58 .18 RPM
SRP009831_ovary 15 .67 RPM
SRP009831_skeletal_muscle 127 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009278 ortholog_one2many 2 retrogenes
retro_cjac_1233, retro_cjac_2379,
Cavia porcellus ENSCPOG00000014961 ortholog_one2one 1 retrogene
retro_cpor_1113,
Homo sapiens ENSG00000136143 ortholog_one2one 3 retrogenes
retro_hsap_2236, retro_hsap_2281, retro_hsap_3445,
Gorilla gorilla ENSGGOG00000008224 ortholog_one2one 3 retrogenes
retro_ggor_1668, retro_ggor_1694, retro_ggor_2327,
Macaca mulatta ENSMMUG00000007539 ortholog_one2many 1 retrogene
retro_mmul_1231,
Mustela putorius furo ENSMPUG00000001488 ortholog_one2one 1 retrogene
retro_mputfur_768,
Nomascus leucogenys ENSNLEG00000002948 ortholog_one2one 3 retrogenes
retro_nleu_1963, retro_nleu_2140, retro_nleu_2302,
Otolemur garnettii ENSOGAG00000007452 ortholog_one2one 1 retrogene
retro_ogar_2196,
Pongo abelii ENSPPYG00000005352 ortholog_one2one 2 retrogenes
retro_pabe_1939, retro_pabe_2852,
Pan troglodytes ENSPTRG00000005859 ortholog_one2one 3 retrogenes
retro_ptro_1581, retro_ptro_1615, retro_ptro_2337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_26 75.06 87.47
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2. retro_acar_52 74.89 88.08
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Download FASTA sequences of all ENSACAG00000014610 retrocopies