Parental gene:

ATP2, CHLREDRAFT_78348

Aliases:None
Description:ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P38482]
Organism:Chlamydomonas reinhardtii
Coordinates:DS496120:1892558..1897334(+)


>CHLREDRAFT_78348
ATGTTGTCCAGCGTGCGCCTCGCTGCCCTTCGGGCGGGCAAGACCAACAGCGTCTTCCAGGCCGTCCGCGCCTTCGCTGC
GGAGCCTGCTGCTGCGGCGACTACTGATGCCGGCTTCGTCAGCCAGGTCATCGGCCCTGTGGTGGATGTGCGTTTCGATG
GCGAGCTGCCTTCGATTCTGAGTGCTCTGGAGGTGCAGGGGCACAATGTGCGCCTGGTGCTGGAGGTGGCGCAGCACATG
GGTGACAACACCGTGCGCTGCGTGGCCATGGACAGCACTGATGGTCTGGTGCGTGGCCAGAAGGTGGTGAACACCGGCTC
CCCCATCAAGGTGCCGGTGGGCCGTGGCACTCTGGGCCGCATCATGAACGTGATTGGCGAGCCCGTCGACGAGCAGGGCC
CCATCGAATGCTCGGAGGTGTGGTCCATCCACCGCGAGGCTCCTGAGTTCACTGAGCAGAGCACTGAGCAGGAGATCCTG
GTGACCGGCATCAAGGTCGTGGACCTGCTGGCTCCCTACCAGCGTGGTGGCAAGATCGGTCTGTTCGGTGGTGCCGGTGT
GGGCAAGACCGTGCTGATTATGGAGCTCATCAACAACGTCGCTAAGGCGCACGGTGGTTTCTCCGTGTTCGCCGGTGTCG
GCGAGCGCACCCGTGAGGGCAACGACCTGTACCGTGAGATGATTGAGTCGGGTGTGATTAAGCTTGGCGACAAGCGCGGC
GAGTCCAAGTGCACCCTGGTGTACGGCCAGATGAACGAGCCCCCGGGTGCCCGTGCCCGTGTGGCCCTGACGGGTCTGAC
TGTGGCCGAGTACTTCCGTGACGTGGAGGGCCAGGACGTGCTGCTGTTCGTGGACAACATCTTCCGCTTCACGCAGGCGA
ACTCGGAGGTGTCTGCCCTGCTGGGCCGCATCCCCTCGGCCGTGGGTTACCAGCCCACCCTGGCCACCGATCTGGGTGGC
CTGCAGGAGCGCATTACCACCACCACCAAGGGTTCCATTACCTCGGTGCAGGCTGTGTACGTGCCCGCCGATGACCTGAC
GGATCCCGCCCCCGCAACCACCTTCGCGCATCTGGACGCCACCACCGTGCTGTCCCGCTCGATTGCCGAGCTGGGCATCT
ACCCCGCCGTGGACCCCCTGGACTCCACCAGCCGCATGCTCAACCCCAACATCATTGGCGCCGAGCACTACAACATCGCC
CGTGGTGTGCAGAAGGTGCTGCAGGACTACAAGAACCTGCAGGATATTATTGCCATTCTGGGTATGGATGAGCTGAGCGA
GGAGGACAAGCTGACCGTGGCGCGCGCCCGCAAGATCCAGCGTTTCCTGTCGCAGCCCTTCCAGGTGGCCGAGGTGTTCA
CCGGCACCCCCGGCAAGTACGTGGACCTGAAGGACACCATCTCCGCCTTCACCGGCATCCTGCAGGGCAAGTACGACGAC
CTTCCTGAGATGGCTTTCTACATGGTGGGCGGCATCCACGAGGTGGTGGAGAAGGCCGACAAGCTGGCCAAGGACGTGGC
GGCCCGCAAGGACGAGAGCAAGAAGGCCAAGTCGTCTGAGGCGCTGAAGGACGTGCCCAGCCTGGAGAAGATGGCGGGCG
AGATCAAGGACGAGGTGATTGACGCCGACGACAGCCTGGAGGAGGACTTCAAGGCGGAGGCCATCAGCAGCGAGAACATG
GTGCTGAACGAGAAGGGCGAGAAGGTGCCCCTGCCCAAGAAGTAA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00006p00059970 ortholog_one2one 1 retrogene
retro_atri_7,
Arabidopsis thaliana AT5G08670 ortholog_one2many 1 retrogene
retro_atha_12,
Oryza sativa indica BGIOSGA017602 ortholog_one2many 2 retrogenes
retro_oind_104, retro_oind_87,
Brassica rapa Bra006013 ortholog_one2many 2 retrogenes
retro_brap_51, retro_brap_57,
Aegilops tauschii F775_32946 ortholog_one2many 1 retrogene
retro_atau_18,
Hordeum vulgare MLOC_70791 ortholog_one2many 1 retrogene
retro_hvul_13,
Oryza glaberrima ORGLA01G0220100 ortholog_one2many 1 retrogene
retro_ogla_47,
Triticum aestivum TRAES3BF058700080CFD_g ortholog_one2many 2 retrogenes
retro_taes_170, retro_taes_31,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_crei_1 71.33 75.96
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Download FASTA sequences of all CHLREDRAFT_78348 retrocopies