Parental gene:

AT5G08670

Aliases:None
Description:ATP synthase alpha/beta family protein [Source:TAIR;Acc:AT5G08670]
Organism:Mouse-ear cress (Arabidopsis thaliana)
Coordinates:5:2818116..2821176(-)


>AT5G08670
ATGGCGTCTCGGAGAGTCTTATCATCTCTTCTCCGTTCATCTTCCGGTAGATCTGCCGCCAAATTAGGCAACCGTAACCC
CAGGCTTCCTTCTCCTTCACCCGCGCGTCCCGCCGCTCCATGTAGCTACCTCCTCGGCCGCGTCGCCGAGTACGCGACCT
CTTCACCTGCAAGCTCAGCTGCGCCATCTTCTGCTCCTGCTAAGGATGAGGGGAAGAAGACCTATGATTACGGTGGCAAA
GGTGCGATCGGGCGTGTTTGCCAGGTCATTGGTGCCATTGTCGATGTGAGATTTGAGGATCAGGAAGGATTGCCACCAAT
CATGACATCTCTCGAGGTGCAGGATCACCCCACAAGGCTAGTGCTTGAGGTGTCTCATCACTTGGGTCAGAATGTCGTCA
GGACCATTGCTATGGATGGTACTGAGGGTCTCGTTCGTGGAAGGAAAGTCCTCAACACTGGCGCTCCAATCACTGTACCT
GTCGGAAGGGCTACTCTTGGACGTATCATGAATGTTCTTGGAGAACCTATTGACGAAAGAGGCGAAATTAAGACCGAACA
TTACTTACCTATTCACAGAGATGCACCGGCTTTGGTTGATCTAGCTACTGGGCAAGAGATCCTGGCCACTGGTATTAAGG
TTGTTGATCTTCTTGCTCCTTACCAAAGAGGAGGAAAGATTGGTCTCTTTGGCGGTGCTGGTGTTGGGAAAACTGTGCTT
ATTATGGAGCTGATCAACAATGTTGCCAAAGCTCATGGTGGTTTCTCTGTGTTTGCTGGTGTGGGAGAACGAACCCGTGA
AGGCAATGACTTGTACAGAGAAATGATTGAGAGTGGTGTCATCAAGCTAGGCGAAAAGCAGTCTGAGAGCAAGTGTGCTC
TAGTGTACGGACAAATGAATGAGCCCCCGGGTGCCCGTGCCCGTGTTGGACTGACTGGTTTGACTGTTGCCGAGTATTTC
CGTGATGCTGAAGGCCAAGACGTTTTGCTTTTCATTGACAACATTTTCCGTTTCACTCAGGCCAACTCTGAAGTGTCTGC
TTTACTCGGTCGTATCCCGTCTGCTGTGGGATACCAGCCAACTCTGGCTTCTGATCTTGGTGCTCTTCAAGAGCGAATTA
CTACCACCAAGAAAGGGTCTATCACCTCAGTCCAAGCCATCTATGTACCTGCTGATGATTTGACTGATCCTGCTCCTGCT
ACAACTTTTGCTCACTTGGACGCCACAACTGTGCTCTCAAGACAGATTTCTGAGCTTGGTATCTACCCTGCTGTGGATCC
TTTGGATTCAACATCCCGTATGCTGTCACCTCACATTCTGGGAGAGGAGCATTACAACACGGCTCGTGGCGTGCAGAAAG
TTCTACAGAACTACAAGAACTTGCAAGATATTATTGCAATTTTGGGTATGGATGAGCTAAGTGAAGATGACAAGTTGACT
GTTGCCCGTGCCCGTAAGATCCAGAGATTCTTGAGTCAGCCGTTCCACGTTGCTGAGATCTTCACTGGTGCCCCTGGAAA
ATATGTCGACCTTAAAGAAAATATCAACAGTTTCCAGGGTTTGTTGGATGGCAAGTACGATGATCTTTCCGAACAATCGT
TTTACATGGTTGGAGGTATCGATGAGGTGGTTGCAAAGGCAGAGAAGATCGCTAAAGAGTCAGCAGCTTAA

Species Parental gene accession Homology type Retrogenes number
Amborella trichopoda AMTR_s00006p00059970 ortholog_one2many 1 retrogene
retro_atri_7,
Oryza sativa indica BGIOSGA017602 ortholog_many2many 2 retrogenes
retro_oind_104, retro_oind_87,
Brassica rapa Bra006013 ortholog_many2many 2 retrogenes
retro_brap_51, retro_brap_57,
Chlamydomonas reinhardtii CHLREDRAFT_78348 ortholog_one2many 1 retrogene
retro_crei_1,
Aegilops tauschii F775_32946 ortholog_many2many 1 retrogene
retro_atau_18,
Hordeum vulgare MLOC_70791 ortholog_many2many 1 retrogene
retro_hvul_13,
Oryza glaberrima ORGLA01G0220100 ortholog_many2many 1 retrogene
retro_ogla_47,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_atha_12 72.45 77.70
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Download FASTA sequences of all AT5G08670 retrocopies