Common name: Amborella
Latin name: Amborella trichopoda
Genome assembly: GCA_000471905.1
All retrocopies: 44
Parental genes: 34

Summary: Number of retrocopies :
Conserved ORF: 17 ORF 27 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_atri_1 68.99 % 97.28 % ORF
2. retro_atri_2 71.04 % 99.11 % ORF
3. retro_atri_3 85.09 % 59.19 % ORF
4. retro_atri_4 98.53 % 100.00 % ORF
5. retro_atri_5 56.02 % 90.66 % ORF
6. retro_atri_6 66.89 % 96.51 % ORF
7. retro_atri_7 70.09 % 80.00 % ORF
8. retro_atri_8 62.46 % 76.35 % ORF
9. retro_atri_9 63.46 % 62.90 % ORF
10. retro_atri_10 89.33 % 55.15 % ORF
11. retro_atri_11 68.77 % 79.95 % ORF
12. retro_atri_12 84.00 % 55.15 % ORF
13. retro_atri_13 50.57 % 59.66 % ORF
14. retro_atri_14 53.47 % 74.44 % ORF
15. retro_atri_15 90.52 % 91.32 % ORF
16. retro_atri_16 87.59 % 57.75 % ORF
17. retro_atri_17 67.03 % 79.82 % ORF
18. retro_atri_18 86.36 % 65.91 % ORF
19. retro_atri_20 87.20 % 78.26 % ORF
20. retro_atri_21 73.01 % 82.32 % ORF
21. retro_atri_22 72.52 % 79.14 % ORF
22. retro_atri_23 82.28 % 55.15 % ORF
23. retro_atri_24 77.24 % 52.94 % ORF
24. retro_atri_25 78.38 % 62.71 % ORF
25. retro_atri_26 86.92 % 77.94 % ORF
26. retro_atri_27 62.16 % 54.73 % ORF
27. retro_atri_30 61.04 % 87.21 % ORF
28. retro_atri_31 87.50 % 52.21 % ORF
29. retro_atri_34 87.31 % 57.51 % ORF
30. retro_atri_35 77.11 % 60.29 % ORF
31. retro_atri_36 71.59 % 60.71 % ORF
32. retro_atri_37 80.37 % 50.23 % ORF
33. retro_atri_38 70.88 % 51.74 % ORF
34. retro_atri_40 74.49 % 68.54 % ORF
35. retro_atri_41 72.22 % 97.80 % ORF
36. retro_atri_42 77.33 % 52.11 % ORF
37. retro_atri_43 86.06 % 58.63 % ORF
38. retro_atri_44 68.35 % 85.56 % ORF
39. retro_atri_45 51.52 % 51.97 % ORF
40. retro_atri_46 79.51 % 87.14 % ORF
41. retro_atri_48 75.58 % 65.15 % ORF
42. retro_atri_49 67.39 % 63.97 % ORF
43. retro_atri_50 80.82 % 100.00 % ORF
44. retro_atri_52 82.14 % 84.85 % ORF
# Ensembl ID Symbol Description
1. AMTR_s00012p00262190 hypothetical protein
2. AMTR_s00069p00126080 hypothetical protein
3. AMTR_s00136p00057270 hypothetical protein
4. AMTR_s00152p00020750 hypothetical protein
5. AMTR_s00104p00132470 hypothetical protein
6. AMTR_s00153p00076780 hypothetical protein
7. AMTR_s00057p00185220 hypothetical protein
8. AMTR_s00129p00121180 Subtilase family protein [Source:Projected from Arabidopsis thaliana (AT3G14240) TAIR;Acc:AT3G14240]
9. AMTR_s00045p00184740 Chaperone DnaJ-domain superfamily protein [Source:Projected from Arabidopsis thaliana (AT1G56300) TAIR;Acc:AT1G56300]
10. AMTR_s00080p00093010 arogenate dehydratase 2 [Source:Projected from Arabidopsis thaliana (AT3G07630) TAIR;Acc:AT3G07630]
11. AMTR_s00025p00199310 hypothetical protein
12. AMTR_s00080p00074790 hypothetical protein
13. AMTR_s00225p00023630 hypothetical protein
14. AMTR_s00080p00025480 hypothetical protein
15. AMTR_s00012p00219470 triosephosphate isomerase [Source:Projected from Arabidopsis thaliana (AT3G55440) TAIR;Acc:AT3G55440]
16. AMTR_s00049p00194290 hypothetical protein
17. AMTR_s00040p00218420 hypothetical protein
18. AMTR_s00007p00238780 hypothetical protein
19. AMTR_s00035p00184080 hypothetical protein
20. AMTR_s00096p00102520 shaggy-like kinase 13 [Source:Projected from Arabidopsis thaliana (AT5G14640) TAIR;Acc:AT5G14640]
21. AMTR_s00088p00117460 hypothetical protein
22. AMTR_s00078p00099060 hypothetical protein
23. AMTR_s00017p00244900 hypothetical protein
24. AMTR_s00056p00156190 early nodulin-related [Source:Projected from Arabidopsis thaliana (AT5G25940) TAIR;Acc:AT5G25940]
25. AMTR_s00107p00103680 hypothetical protein
26. AMTR_s00048p00196380 acyl-CoA-binding protein 6 [Source:Projected from Arabidopsis thaliana (AT1G31812) TAIR;Acc:AT1G31812]
27. AMTR_s00006p00059970 hypothetical protein
28. AMTR_s00135p00066200 hypothetical protein
29. AMTR_s00028p00023590 hypothetical protein
30. AMTR_s00078p00164770 hypothetical protein
31. AMTR_s00062p00036220 hypothetical protein
32. AMTR_s00045p00165520 nuclear encoded CLP protease 5 [Source:Projected from Arabidopsis thaliana (AT1G02560) TAIR;Acc:AT1G02560]
33. AMTR_s00025p00110680 ribonucleotide reductase 2A [Source:Projected from Arabidopsis thaliana (AT3G23580) TAIR;Acc:AT3G23580]
34. AMTR_s00060p00095260 hypothetical protein
Retrogenes FASTA BED
TSV (download all or selected columns from MySQL table)
Parental genes FASTA BED
TSV (download all or selected columns from MySQL table)