Parental gene:

ORGLA07G0149800

Aliases:None
Description:None
Organism:African rice (Oryza glaberrima)
Coordinates:7:16397395..16399688(-)


>ORGLA07G0149800
ATGGCCGGCGGCGTGGTGGTGAACAACGGAGGGGGGAAGGACTACCCCGGGAAGCTCACCATGTTCGTCCTCTTCGCCTG
CATCGTCGCAGCCACCGGCGGCCTCATCTTCGGATATGACATCGGCATCTCCGGGGGTGTGACGTCGATGAACCCGTTCC
TGATCAAGTTCTTCCCGTCGGTGTACCGGAAGGAGCAGGCGGCGGAGAAGAACCAGAGCAACCAGTACTGCAAGTTCGAC
AGCCCGCTGCTGACCATGTTCACCTCGTCGCTCTACCTCGCCGCGCTCGTCGCCTCCTTCTTCGCGTCCACCGTCACCCG
CGTCGCGGGGCGCAAGTGGTCCATGTTCGGCGGCGGCGTCACCTTCCTCGTCGGCGCCGCGCTCAACGGCGCCGCCAAGA
ACGTGCTCATGCTCATCCTCGGCCGCGTCCTCCTCGGTGTCGGCGTCGGCTTCGCCAACCAGTCTGTGCCGCTGTACCTG
TCGGAGATGGCGCCGGCGAGGCTGCGCGGGATGCTCAACATCGGGTTCCAGCTGATGATCACCATTGGCATCCTGTGCGC
CAACCTGATCAACTACGGGACTGCCAAGATCAAGGGCGGGTGGGGGTGGCGCGTGAGCCTGGCGCTGGCGGCGGTGCCGG
CGGCGATCATCGCCGTGGGCGCGCTCTTCCTCCCTGACACGCCCAACTCCCTCATCGACCGCGGCCACACCGACGCCGCC
AAGCGCATGCTCCGGCGCGTGCGCGGCACCGACGACATCGAGGAGGAGTACAACGACCTGGTGGCCGCCAGCGAGGAGTC
CAAGCTCGTGGCGCACCCGTGGCGGAACATCCTCCAGCGCCGGTACAGGCCGCAGCTGACCATGGCCATCGCCATCCCGC
TGTTCCAGCAGCTGACGGGGATCAACGTCATCATGTTCTACGCGCCGGTGCTGTTCAAGACGCTGGGATTCGCCGACGAC
GCGTCCCTCATGTCCGCCGTGATCACCGGCCTCGTCAACGTCTTCGCCACCTTCGTGTCCATCGTGACCGTCGACCGCCT
CGGCCGCCGGAAGCTGTTCCTCCAGGGCGGGACGCAGATGCTGGCGTGCCAGATCGTCGTCGGAAGCCTCATCGGCGCCA
AGTTCGGGTTCTCCGGCGTGGCCGACATCCCCAAGGCGTACGCGGCGTTCGTGGTGCTCTTCATCTGCGCCTACGTCGCC
GGGTTCGCGTGGTCGTGGGGGCCCCTGGGCTGGCTCGTCCCCAGCGAGATCTTCCCGCTGGAGATCAGGTCGGCGGGGCA
GAGCATCAACGTGTCGGTGAACATGCTCTTCACCTTCATCATCGCGCAGGCGTTCCTCCCCATGCTCTGCCGCTTCAAGT
TCATCCTCTTCTTCTTCTTCGGCGCGTGGGTGGTGATCATGACGCTGTTCGTCGCCTTCTTCCTGCCGGAGACCAAGAAC
GTGCCCATCGAGGAGATGGTGCTCGTCTGGAAGTCGCACTGGTACTGGGGCAGGTTCATCCGCGACGAGGACGTGCACGT
CGGCGCCGACGTCGAGATGCCCGCCGCCGGCAACCGCAACGGCAAGGTCGACCCGGCCAAGCTCGCCAACTGA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI1G24820 ortholog_one2one 1 retrogene
retro_bdis_38,
Hordeum vulgare MLOC_55525 ortholog_one2one 1 retrogene
retro_hvul_80,
Medicago truncatula MTR_0009s0370 ortholog_many2many 1 retrogene
retro_mtru_23,
Oryza glumaepatula OGLUM07G18360 ortholog_one2one 1 retrogene
retro_oglu_7,
Oryza meridionalis OMERI07G15470 ortholog_one2one 2 retrogenes
retro_omer_15, retro_omer_8,
Oryza nivara ONIVA07G16940 ortholog_one2one 1 retrogene
retro_oniv_2,
Oryza punctata OPUNC07G17520 ortholog_one2one 1 retrogene
retro_opun_36,
Oryza rufipogon ORUFI07G19310 ortholog_one2one 1 retrogene
retro_oruf_45,
Oryza sativa japonica OS07G0559700 ortholog_one2one 1 retrogene
retro_osat_29,
Triticum aestivum Traes_2BS_7DF366FE1 ortholog_one2one 1 retrogene
retro_taes_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogla_30 71.06 93.96
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Download FASTA sequences of all ORGLA07G0149800 retrocopies