Parental gene:

MTR_0009s0370

Aliases:None
Description:sugar porter (SP) family MFS transporter
Organism:Barrel medic (Medicago truncatula)
Coordinates:scaffold0009:185808..188965(-)


>MTR_0009s0370
ATGGGTGTTGAAGCAAACGTGGATGGTCCATCCAAATATCCAGGAAAACTCACCTTTAGGGTGATTATCACTTGTATCAT
GGCTGCCACTGGTGGATTAATCTTTGGTTATGATCATGGTGTTTCAGGTGGAGTAACATCAATGGATTCTTTCTTGAAAC
GATTTTTTCCATCTGTTTATGAACAGGAATCAAATTTGAAACCTTCTGCAAATCAATATTGCAAATTCAACAGTCAAATA
CTGACATTGTTTACATCTTCCCTTTATATAAGTGCTCTTGTTGCTGGTCTTGGGGCATCAAGCATAACAAGAGCTTTAGG
TAGGCGAACAACGATGATTTTGGGTGGAATATTCTTTGTGTCGGGCGCATTACTCAATGGATTAGCCATGAACATTGCGA
TGCTTATCGCTGGAAGGTTGTTGCTTGGTTTTGGTATTGGGTGTGCCAATCAGGCAGTTCCAATCTATCTATCAGAAATG
GCACCTTATAAATACAGGGGTGCTCTAAACATGTGTTTTCAATTGTCAATTACCATTGGTATTTTTACAGCCAATATGTT
CAACTATTACTTTTCCAAGATACTAAATGGTGAGGGATGGCGATTAAGTTTGGGGCTAGGTGCGGTACCTGCAGTGGTTT
TCATTATAGGCTCAATTTGTCTTCCTGATTCGCCAAACTCGCTTGTTACACGTGGTCGTCACGAAGAAGCAAGAAAGGAG
CTTGTGAAAATCCGCGGTACTGATGATGTTGATGCTGAGTTTAGAGATATTGTTGCTGCTAGTGAAGCCTCGGCTAAAGT
GAAACACCCTTGGAAAACCTTGCAGGAGAGAAAATATAGGCCACAGCTTGTTTTCGCCATATTGATTCCTTTCTTCCAAC
AATTCACTGGATTGAATGTGATCACATTCTATGCTCCTATACTGTTTAGAACAATTGGTTTTGGAAGTCAAGCTTCTCTC
ATGTCTGCCGCGATCATTGGAAGCTTTAAACCTGTTTCCACTTTGGTTTCAATTTTTGTTGTAGATAAATTTGGACGGCG
CGCCCTTTTCCTTGAGGGTGGTGTTCAAATGTTGATTTGTCAGATTATCATGACAGTTGCTATTGCTGTCACATTTGGAA
CAAGTGGCAACCCAGGGAAACTACCTCATTGGTATGCAATCACCATTGTTGGGATAATCTGTGTATATGTTTCAGGTTAT
GCATGGTCTTGGGGACCTCTTGGATGGTTAGTACCTAGCGAAATTGTTCCACTCGAAATTCGATCCGCTTGTCAGAGTAT
TACAGTTGCTGTCAATATGACTTCAACTTTCTTCATAGCTCAACTCTTCACGGAAATGCTTTGTCACTTCAAGTTTGGTT
TGTTCATCTTCTTTGGATGCTTTGTGATCCTCATGACTTTCTTCATCTACAAGTTTTTTCCAGAAACAAAGGGTGTCCCG
CTCGAGGAAATGCATATGGTTTGGAGGAAACACCCCTTTTGGGGAAAGTTTTTGGAGGCAGAGGATCAAAAAATACAATC
TTCTAAACTAGACACCTAA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA024972 ortholog_many2many 1 retrogene
retro_oind_19,
Brachypodium distachyon BRADI1G24820 ortholog_many2many 1 retrogene
retro_bdis_38,
Hordeum vulgare MLOC_55525 ortholog_many2many 1 retrogene
retro_hvul_80,
Oryza barthii OBART07G00410 ortholog_many2many 1 retrogene
retro_obar_21,
Oryza glumaepatula OGLUM07G00430 ortholog_many2many 1 retrogene
retro_oglu_47,
Oryza glumaepatula OGLUM07G18360 ortholog_many2many 1 retrogene
retro_oglu_7,
Oryza meridionalis OMERI07G15470 ortholog_many2many 2 retrogenes
retro_omer_15, retro_omer_8,
Oryza nivara ONIVA07G16940 ortholog_many2many 1 retrogene
retro_oniv_2,
Oryza punctata OPUNC07G17520 ortholog_many2many 1 retrogene
retro_opun_36,
Oryza glaberrima ORGLA07G0149800 ortholog_many2many 1 retrogene
retro_ogla_30,
Oryza rufipogon ORUFI07G00430 ortholog_many2many 1 retrogene
retro_oruf_37,
Oryza rufipogon ORUFI07G19310 ortholog_many2many 1 retrogene
retro_oruf_45,
Oryza sativa japonica OS07G0106200 ortholog_many2many 1 retrogene
retro_osat_43,
Oryza sativa japonica OS07G0559700 ortholog_many2many 1 retrogene
retro_osat_29,
Triticum aestivum Traes_2BS_7DF366FE1 ortholog_many2many 1 retrogene
retro_taes_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mtru_23 79.10 100.00
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Download FASTA sequences of all MTR_0009s0370 retrocopies