Parental gene:

ORGLA05G0165000

Aliases:None
Description:None
Organism:African rice (Oryza glaberrima)
Coordinates:5:17400186..17401717(-)


>ORGLA05G0165000
ATGGCCGCCGAGATCTGCCGCGAGGAGGCGGCCAAGTCGATGCCGGCTGCGGCGGCCGGCGCCACGGCGATCGCCAGGCG
GCGCCGTAGGGTGGAGGGCTTCCGCTTTGCGGCCGGCTCTCTCGAGCCGCCGCAGGAGGATGCTGACGCCGGTGTGGCGC
GCTGCGGCAAGCGGCAGAGGGTGGCGGGCGCGCGTGCAGGCGCAGGCGCGGCGACCGCAGGCCCGTGCCGTCCGTCGGCC
GGCGCGGGTTTCGGGTCCAGGTGGTGGCCGAGGTACGGCGTCACCTCCGTGTTCGGCCGGCGGCGCGAGATGGAGGACGC
CGTGTCCATCAGGCCGGACTTCCTGCGGGGCTCCACCTCTTCCGGCAAGCACCACTTCTTCGGCGTCTTTGACGGCCATG
GTTGCTCCCATGTCGCGAGGATGTGCCAGGACCGGATGCATGAGCTCGTCGTCGACGCGTACAAGAAGGCGGTCTCCGGC
AAGGAGGCGGCGGCGGCGGCACCGGCGTGGAAGGACGTCATGGAGAAAGGGTTCGCGCGGATGGACGATGAGGCGACGAT
CTGGGCCAAGAGCCGCACCGGCGGTGAGCCGGCCTGCCGCTGCGAGCTGCAGACGCCAGCACGGTGCGACCACGTGGGCT
CGACCGCCGTTGTCGCGGTCGTCGGTCCTAACCGCGTCGTCGTCGCCAACTCCGGCGACTCCCGTGCCGTCCTCTGCCGC
GCCGGCGTCCCCGTCCCCCTCTCCGTCGATCACAAGCCGGACCGGCCGGACGAGCTGGAGCGCATCAAGGCGGCGGGCGG
CCGCGTCATCTACTGGGACGGCGCCAGGGTGCTCGGTGTCCTCGCCATGTCTCGAGCCATCGGGGACGGCTACCTGAAGC
CGTACGTGACGTCGGAGCCGGAGGTGACGGTGACGGAGCGCGCCGACGACGACGAGTGCCTGATCCTGGCGAGCGACGGG
CTGTGGGACGTGGTGACCAACGAGATGGCGTGCGAGGTCGTCCGGGCGTGCTTCCGGAGCAACGGCCCGCCGTCGCCGCC
GGGATGCTCCCGCCCCAAAGCCGTGCTCCCGCCGCCCGCCGGCGCGTCAGGCGGCGGCGGCGGCGACGCCGTGGTGAAGG
GGGTCGACAAGGCCGAGTCCGACAAGGCGTGCGCCGACGCGGCATTGCTTCTCGCGAAGCTCGCGATCGCCCGGCGGAGC
GCCGACAACGTGAGCGTCGTCGTCGTGGATCTCCGCCGGCCGGTGCCGTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA017925 ortholog_one2one 1 retrogene
retro_oind_21,
Oryza glumaepatula OGLUM05G20150 ortholog_one2one 1 retrogene
retro_oglu_4,
Oryza meridionalis OMERI05G16600 ortholog_one2one 1 retrogene
retro_omer_16,
Oryza nivara ONIVA05G19940 ortholog_one2one 1 retrogene
retro_oniv_23,
Oryza rufipogon ORUFI05G20280 ortholog_one2one 1 retrogene
retro_oruf_40,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogla_36 59.26 69.71
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Download FASTA sequences of all ORGLA05G0165000 retrocopies