Parental gene:

BGIOSGA017925

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:5:23820017..23821548(-)


>BGIOSGA017925
ATGGCCGCCGAGATCTGCCGCGAGGAGGCGGCCAAGTCGATGCCGGCTGCGGCGGCCGGCGCCACGGCGATCGCCAGGCG
GCGCCGTAGGGTGGAGGGCTTCCGCTTTGCGGCCGGCTCTCTCGAGCCGCCGCAGGAGGATGCTGACGCCGGTGTGGCGC
GCTGCGGCAAGCGGCAGAGGGTGGCGGGCGCGCGTGCGGGCGCAGGCGCGGCGACCGCAGGCCCGTGCCGTCCGTCGGCC
GGCGCGGGTTTCGGGTCCAGGTGGTGGCCGAGGTACGGCGTCACCTCCGTGTTCGGCCGGCGGCGCGAGATGGAGGACGC
CGTGTCCATCAGGCCGGACTTCCTGCGGGGCTCCACCTCTTCCGGCAAGCACCACTTCTTCGGCGTCTTTGACGGCCATG
GTTGCTCCCATGTCGCGAGGATGTGCCAGGACCGGATGCATGAGCTCGTCGTCGACGCGTACAAGAAGGCGGTCTCCGGC
AAGGAGGCGGCGGCGGCGGCACCGGCGTGGAAGGACGTCATGGAGAAAGGGTTCGCGCGGATGGACGATGAGGCGACGAT
CTGGGCCAAGAGCCGCACCGGCGGTGAGCCGGCCTGCCGCTGCGAGCTGCAGACGCCAGCACGGTGCGACCACGTGGGCT
CGACCGCCGTTGTCGCGGTCGTCGGTCCTAACCGCGTCGTCGTCGCCAACTCCGGCGACTCCCGTGCCGTCCTCTGCCGC
GCCGGCGTCCCCGTCCCCCTCTCCGTCGACCACAAGCCGGACCGGCCGGACGAGCTGGAGCGCATCAAGGCGGCGGGCGG
CCGCGTCATCTACTGGGACGGCGCCAGGGTGCTCGGCGTCCTCGCCATGTCTCGAGCCATCGGGGACGGCTACCTGAAGC
CGTACGTGACGTCGGAGCCGGAGGTGACGGTGACGGAGCGCGCCGACGACGATGAGTGCCTGATCCTGGCGAGCGACGGG
CTGTGGGACGTGGTGACCAACGAGATGGCGTGCGAGGTCGTCCGGGCGTGCTTCCGGAGCAACGGCCCGCCGTCGCCGCC
GGGATGCTCCCGCCCCAAAGCCGTGCTCCCGCCGCCCGCCGGCGCGTCAGGCGGCGGCGGCGGCGACGCCGTGGTGAAGG
GGGTCGACAAGGCCGAGTCCGACAAGGCGTGCGCCGACGCGGCATTGCTTCTCGCGAAGCTCGCGATCGCCCGGCGGAGC
GCCGACAACGTGAGCGTCGTCATCGTGGATCTCCGCCGGCCGGTGCCGTGA

Species Parental gene accession Homology type Retrogenes number
Oryza glumaepatula OGLUM05G20150 ortholog_one2one 1 retrogene
retro_oglu_4,
Oryza meridionalis OMERI05G16600 ortholog_one2one 1 retrogene
retro_omer_16,
Oryza nivara ONIVA05G19940 ortholog_one2one 1 retrogene
retro_oniv_23,
Oryza glaberrima ORGLA05G0165000 ortholog_one2one 1 retrogene
retro_ogla_36,
Oryza rufipogon ORUFI05G20280 ortholog_one2one 1 retrogene
retro_oruf_40,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_21 59.66 69.71
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Download FASTA sequences of all BGIOSGA017925 retrocopies