Parental gene:

OGLUM05G09560

Aliases:None
Description:None
Organism:Oryza glumaepatula
Coordinates:5:9948801..9951377(-)


>OGLUM05G09560
ATGCATATGAGGATGGTCGCCAACCTCCAAAAAGTTTGTTTCTTCCTTCCCGCCATCTCCCACCTCTCCCGCCATCTATC
TCTGACCTCTCCTCTGCACATGCTCATCAGCTTCCCGTTCACTGCTCAAATGGCGTGCTTCCTGGTCGCGGCGGCGGTGG
TGGCGTTGGCTGCGGCGGCGGCGGCGCCGGCGAGGGCTATCCCGTTCACGGAGAACGATCTCTCGTCGGAGGAGAGCCTG
CGGGCGCTGTACGAGCGGTGGCGGAGCCGGTACACCGTGTCGCGGCCGGCGGCATCAGGAGGCGTTGGCAACGACGACGG
CGAGGCTCGCCGGCGGTTCAACGTGTTCGTGGAGAACGCGAGGTACGTCCACGAGGCGAACAGTAGGAGGGGCGGCCGGC
CGTTCAGGCTGGCGCTGAACAAGTTCGCCGACATGACGACGGACGAGTTCCGGCGCACCTACGCGGGCTCCAGGGCGCGC
CACCACCGCAGCCTGAGCGGCGGCCGCGGCGGCGAGGGGGGCTCCTTCCGGTACGGCGGAGAGGACGAGGACAACCTGCC
GCCGGCGGTCGACTGGCGCGAGCGCGGCGCCGTCACCGGCATCAAGGATCAAGGCCAATGCGGGAGCTGCTGGGCGTTCT
CGGCGGTGGCGGCGGTGGAGGGCGTGAACAAGATCAAGACGGGGAGGCTGGTGGCGCTGTCGGAGCAGGAGCTGGTGGAC
TGCGACACCGGTGATAACCAGGGCTGCGACGGCGGGCTCATGGACTACGCGTTCCAGTTCATCAAGAGGAACGGAGGGAT
CACCACCGAGTCCAACTACCCATACAGAGCGGAGCAAGGGAGGTGTAACAAGGCAAAGGCAAGCTCTCACGATGTAACGA
TTGATGGCTACGAGGACGTTCCTGCCAATGACGAGTTGGCTCTACAGAAAGCAGTCGCAAACCAGCCTGTGGCTGTTGCA
ATAGAGGCTAGCGGCCAAGATTTCCAGTTCTATTCGGAGGGTGTCTTCACCGGAGAATGCGGCACGGATCTGGACCATGG
TGTTGCCGCCGTCGGTTACGGTATAACTCGAGACGGCACCAAGTACTGGATCGTCAAGAACTCGTGGGGCGAGGATTGGG
GCGAGAGAGGGTACATCAGAATGCAGCGTGGTGTGTCGTCAGGCTCGAATGGGCTGTGTGGCATCGCGATGGAGGCTTCT
TACCCTGTCAAATCAGGAGCACGCGATGCTGCTGCAAGTAACAGAGTTGTTAAAGACGAGCTGTGA

Species Parental gene accession Homology type Retrogenes number
Brachypodium distachyon BRADI4G19707 ortholog_one2one 2 retrogenes
retro_bdis_26, retro_bdis_41,
Zea mays GRMZM2G099765 ortholog_one2one 1 retrogene
retro_zmay_16,
Hordeum vulgare MLOC_73076 ortholog_one2one 2 retrogenes
retro_hvul_23, retro_hvul_68,
Oryza barthii OBART11G08490 ortholog_one2one 1 retrogene
retro_obar_27,
Oryza meridionalis OMERI11G07520 ortholog_one2one 1 retrogene
retro_omer_2,
Setaria italica Si026545m.g ortholog_one2one 1 retrogene
retro_sita_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oglu_31 71.49 52.26
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Download FASTA sequences of all OGLUM05G09560 retrocopies