Parental gene:

RHO (1 of 2), ENSXMAG00000017297

Aliases:None
Description:rhodopsin [Source:HGNC Symbol;Acc:10012]
Organism:Platyfish (Xiphophorus maculatus)
Coordinates:JH556804.1:480613..485284(-)


>ENSXMAG00000017297
ATGAATGGCACAGAAGGACCCAACTTTTACGTCCCCATGTCTAATAGGACAGGGTTGGTGCTCAGCCCATTTGAGCACCC
TCAGTACTACCTGGCCGAGCCGTGGAAGTACTCTCTTCTGGCCGCATACATGCTGTTCCTCATCATCATGGCCTTCCCCA
TTAACTTCCTCACCCTTCACGTCACCATCAAGCACAAAAAGCTGCGAACCCCGCTGAACTATGTTCTGCTCAACCTGGCG
GTGGCCGACCTTTTCATGATAGTTGGAGGATTCACGGTGACCCTGTACACGGCTCTGCATGGATACTTCAGCCTGGGTGT
CACCGGCTGCAACGTTGAGGGGTTCTTTGCCACTTTAGGAGGGGAGATTGCCCTCTGGTCTCTGGTCGTTTTGGCTGTTG
AGCGCTACATTGTGATCTGTAAGCCTATGACCAACTTCCGCTTCGAGGAAAAACACGCCATCGCCGGCTTGGCGTTCTCC
TGGGTCATGGCCCTGACCTGTGCTGCGCCGCCTCTATTCGGATGGTCCCGGTACATCCCAGAGGGCATGCAGTGTTCCTG
TGGGATTGACTACTACACTCCCAAGCCGGAGATCAACAACACCTCATTTGTCATCTATATGTTCGTCCTCCACTTCTGCA
TTCCCCTCTTCATCATTTTCTTTTGCTACAGTCGCCTGCTCTGTACTGTGCGAGCGGCTGCAGCTCAGCAGCAGGAGTCT
GAAACCACCCAAAGAGCAGAGAAGGAAGTGACACGTATGGTCATAGTGATGGTGATCTCCTTCCTGGTGTGCTGGGTGCC
CTACGCCACTGTGGCCTGGTACATCTTTGCCAATCAGGGAGTTGAGTTCGGACCAGTGTTCATGACGGCTCCAGCCTTCT
TCGCCAAGAGCGCTGCTCTCTACAATCCAGTCATCTACATTCTGCTGAACAGACAGTTCAGAAACTGCATGATCACCACA
GTGTGCTGTGGAAAGAACCCATTCGGAGATGATGAGGCCACCGCCGCAGTCTCCAAAACCCAGACTTCATCCGTCTCCTC
CAGCCAGGTGGCCCCTGCTTGA

Species Parental gene accession Homology type Retrogenes number
Gadus morhua ENSGMOG00000013755 ortholog_one2one 1 retrogene
retro_gmor_7,
Oreochromis niloticus ENSONIG00000017219 ortholog_one2one 1 retrogene
retro_onil_16,
Oryzias latipes ENSORLG00000010979 ortholog_one2one 1 retrogene
retro_olat_6,
Tetraodon nigroviridis ENSTNIG00000017925 ortholog_one2one 1 retrogene
retro_tnig_20,
Takifugu rubripes ENSTRUG00000010617 ortholog_one2one 1 retrogene
retro_trub_18,
Xiphophorus maculatus ENSXMAG00000015929 other_paralog 1 retrogene
retro_xmac_7,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_xmac_11 72.32 100.00
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Download FASTA sequences of all ENSXMAG00000017297 retrocopies