Parental gene:

NAP1L1, ENSTTRG00000017062

Aliases:None
Description:nucleosome assembly protein 1-like 1 [Source:HGNC Symbol;Acc:7637]
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_102871:53626..75531(-)


>ENSTTRG00000017062
ATGGCAGACATCGACAACAAAGAACAGTCTGAACTTGATCAAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGCGTCAGCTGACTGTTCAGATGATGCAAAATCCTCAGATTCTTGCAGCCCTTCAAG
AAAGACTTGATGGTCTGGTAGAAACACCAACAGGATACATTGAAAGCTTGCCTAGGGTAGTTAAAAGACGCGTGAATGCT
CTCAAAAACCTTCAAGTTAAATGTGCACAGATAGAAGCCAAGTTCTATGAGGAAGTTCATGATCTTGAAAGAAAGTATGC
TGTTCTCTATCAACCTCTATTTGATAAGCGATTTGAGATCATTAATGCCATTTATGAACCTACAGAAGAAGAATGTGAAT
GGAAACCAGATGAGGAAGATGAAATTTCGGAGGAGCTAAAAGAAAAGGCCAAGATTGAAGATGAGAAAAAGGATGAAGAA
AAAGAAGACCCCAAAGGAATTCCTGAATTTTGGTTGACCGTTTTTAAGAATGTTGACTTGCTCAGTGATATGGTTCAGGA
ACATGATGAACCTATTCTGAAGCACTTGAAAGATATTAAAGTGAAGTTCTCAGATGCTGGTCAGCCTATGAGTTTTGTCT
TAGAATTTCACTTTGAACCCAATGAATATTTCACAAATGAAGTATTGACAAAGACATATAGGATGAGGTCAGAACCAGAT
GATTCTGATCCTTTTTCTTTTGATGGACCAGAAATTATGGGTTGTACAGGGTGCCAGATAGATTGGAAAAAAGGGAAGAA
TGTCACTTTGAAAACCATTAAGAAGAAGCAGAAACACAAGGGACGTGGGACAGTTCGTACTGTGACCAAAACAGTTTCTA
ATGACTCTTTCTTTAATTTTTTTGCCCCTCCTGAAGTTCCTGAGAGTGGAGATCTGGATGACGATGCTGAAGCTATCCTT
GCTGCGGACTTTGAAATTGGTCACTTTTTACGTGAGCGCATAATCCCAAGATCAGTGTTATACTTTACTGGAGAAGCTAT
TGAAGATGATGATGATGATTATGATGAAGAAGGTGAAGAAGCGGATGAGGAAGGGGAAGAAGAAGGAGATGAGGAAAATG
ATCCAGACTATGACCCAAAGAAGGATCAAAACCCAGCAGAGTGCAAGCAGCAGTGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020908 possible_ortholog 8 retrogenes
retro_btau_1319, retro_btau_1324, retro_btau_1462, retro_btau_1487, retro_btau_474, retro_btau_652, retro_btau_70, retro_btau_935,
Macropus eugenii ENSMEUG00000013702 ortholog_one2one 2 retrogenes
retro_meug_1031, retro_meug_604,
Macaca mulatta ENSMMUG00000015583 possible_ortholog 1 retrogene
retro_mmul_233,
Monodelphis domestica ENSMODG00000020456 ortholog_one2many 4 retrogenes
retro_mdom_1476, retro_mdom_1638, retro_mdom_520, retro_mdom_724,
Mustela putorius furo ENSMPUG00000017474 possible_ortholog 1 retrogene
retro_mputfur_505,
Mus musculus ENSMUSG00000058799 possible_ortholog 1 retrogene
retro_mmus_263,
Oryctolagus cuniculus ENSOCUG00000013857 ortholog_one2one 1 retrogene
retro_ocun_834,
Rattus norvegicus ENSRNOG00000003890 possible_ortholog 1 retrogene
retro_rnor_150,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_160 85.80 86.45
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2. retro_ttru_1921 89.08 72.12
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Download FASTA sequences of all ENSTTRG00000017062 retrocopies