Parental gene:

PCBD2, ENSTTRG00000016874

Aliases:None
Description:pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2 [Source:HGNC Symbol;Acc:24474]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_865:774441..824506(+)


>ENSTTRG00000016874
GCTGCGGCGCTGGGGGCGCGAGGGGCGACGCGGCGTTGGTTCGCGGCGCTGCGGGGCAGGAGCCAGAGCCTCGCGGCCAT
GTCAGCAGATGCTCACTGGTTGACAGCAGAGGAGAGGAACCAAGTTATACTTGACCTTAAAGCAGCAGGATGGTCGGAAT
TAAGTGAGAGAGATGCCATCTACAAAGAGTTCTCTTTCAAAAATTTTAATCAGGCATTTGGCTTTATGTCCCGAGTTGCC
CTACAAGCAGAGAAGATGAATCATCACCCGGAGTGGTTCAATGTGTACAACAAGGTTCAGATAACTCTCACATCACATGA
CTGTGGAGGACTGACCAAAAGAGATGTGAAACTGGCCAAGTTTATTGAAAAAGCAGCTGCTTCTGTGTGA

Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000019125 ortholog_one2one 2 retrogenes
retro_dnov_645, retro_dnov_660,
Equus caballus ENSECAG00000015810 ortholog_one2one 2 retrogenes
retro_ecab_489, retro_ecab_871,
Erinaceus europaeus ENSEEUG00000007051 ortholog_one2one 1 retrogene
retro_eeur_190,
Echinops telfairi ENSETEG00000016658 ortholog_one2one 2 retrogenes
retro_etel_1252, retro_etel_75,
Macropus eugenii ENSMEUG00000003784 ortholog_one2one 1 retrogene
retro_meug_1185,
Myotis lucifugus ENSMLUG00000012638 ortholog_one2one 1 retrogene
retro_mluc_1445,
Monodelphis domestica ENSMODG00000014351 ortholog_one2one 1 retrogene
retro_mdom_1369,
Pteropus vampyrus ENSPVAG00000000384 ortholog_one2one 2 retrogenes
retro_pvam_63, retro_pvam_750,
Tursiops truncatus ENSTTRG00000005775 within_species_paralog 1 retrogene
retro_ttru_1541,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_359 77.86 100.00
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2. retro_ttru_511 77.67 79.07
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3. retro_ttru_1135 85.71 97.67
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Download FASTA sequences of all ENSTTRG00000016874 retrocopies