Parental gene:

ENSTTRG00000013656

Aliases:None
Description:None
Organism:Dolphin (Tursiops truncatus)
Coordinates:scaffold_94044:11117..13108(+)


>ENSTTRG00000013656
ATGGCCTCCGTCTCGGAGCTCGCCTGCATCTACTCGGCCCTCATCCTACACGACGATGAGGTGACGGTCACGGAGGATAA
GATCAATGCCCTCATTAAAGCAGCCGGTGTAAATGTTGAACCTTTCTGGCCAGGCTTGTTTGCAAAGGCTTTGGCCAATG
TCAACATCGGGAGCCTCATCTGCAATGTGGGGGCAGGTGGACCTGCCCCAGCAGCTGGTGCTGCACCAGCAGGAGGTCCT
GCCCCCTCCACCACTGCTGCCCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCTGAAGAGTCTGATGATGA
CATGGGCTTTGGTCTTTTTGACTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005944 ortholog_one2one 10 retrogenes
retro_chof_1312, retro_chof_1527, retro_chof_1753, retro_chof_1944, retro_chof_2325, retro_chof_2461, retro_chof_2714, retro_chof_337, retro_chof_666, retro_chof_928,
Felis catus ENSFCAG00000032037 ortholog_one2one 23 retrogenes
retro_fcat_1034, retro_fcat_1047, retro_fcat_1089, retro_fcat_1207, retro_fcat_1244, retro_fcat_1436, retro_fcat_1466, retro_fcat_1550, retro_fcat_1580, retro_fcat_1594, retro_fcat_1617, retro_fcat_1797, retro_fcat_1972, retro_fcat_552, retro_fcat_56, retro_fcat_571, retro_fcat_597, retro_fcat_825, retro_fcat_849, retro_fcat_908, retro_fcat_92, retro_fcat_928, retro_fcat_947,
Latimeria chalumnae ENSLACG00000012630 ortholog_many2many 1 retrogene
retro_lcha_7,
Macropus eugenii ENSMEUG00000015277 possible_ortholog 6 retrogenes
retro_meug_1096, retro_meug_1283, retro_meug_1312, retro_meug_1401, retro_meug_1515, retro_meug_793,
Macropus eugenii ENSMEUG00000015282 ortholog_many2many 2 retrogenes
retro_meug_207, retro_meug_45,
Monodelphis domestica ENSMODG00000009209 possible_ortholog 1 retrogene
retro_mdom_1022,
Monodelphis domestica ENSMODG00000009218 ortholog_many2many 4 retrogenes
retro_mdom_1168, retro_mdom_2001, retro_mdom_385, retro_mdom_50,
Oryctolagus cuniculus ENSOCUG00000015087 possible_ortholog 8 retrogenes
retro_ocun_1009, retro_ocun_1464, retro_ocun_1655, retro_ocun_1735, retro_ocun_48, retro_ocun_551, retro_ocun_647, retro_ocun_884,
Ochotona princeps ENSOPRG00000001163 possible_ortholog 11 retrogenes
retro_opri_1010, retro_opri_130, retro_opri_214, retro_opri_245, retro_opri_38, retro_opri_530, retro_opri_645, retro_opri_768, retro_opri_784, retro_opri_96, retro_opri_972,
Sarcophilus harrisii ENSSHAG00000014818 possible_ortholog 6 retrogenes
retro_shar_182, retro_shar_234, retro_shar_449, retro_shar_550, retro_shar_614, retro_shar_742,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_28 89.58 84.21
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2. retro_ttru_182 92.17 100.00
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3. retro_ttru_227 67.68 85.09
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4. retro_ttru_266 68.32 87.72
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5. retro_ttru_389 66.96 99.12
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6. retro_ttru_553 88.60 100.00
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7. retro_ttru_626 73.39 94.74
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8. retro_ttru_666 92.11 100.00
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9. retro_ttru_679 83.33 52.63
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10. retro_ttru_687 70.43 98.25
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11. retro_ttru_711 79.69 55.26
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12. retro_ttru_755 75.00 100.00
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13. retro_ttru_768 83.33 100.00
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14. retro_ttru_803 59.32 50.88
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15. retro_ttru_1388 67.53 67.54
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16. retro_ttru_1502 93.86 100.00
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17. retro_ttru_1645 81.58 100.00
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18. retro_ttru_1730 70.97 81.58
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19. retro_ttru_1820 70.13 65.79
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20. retro_ttru_1826 78.46 57.02
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Download FASTA sequences of all ENSTTRG00000013656 retrocopies