Parental gene:

NUDT4, ENSTBEG00000012198

Aliases:None
Description:nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:scaffold_122001:107422..127608(+)


>ENSTBEG00000012198
ATGATGAAGTTCAAGCCTAACCAGACGCGGACCTATGACCGCGAGGGCTTCAAGAAGCGGGCGGCGTGCCTGTGCTTCCG
GAGCGAGCAGGAGGACGAGGTGCTGTTGGTGAGTAGCAGTCGGTATCCAGACCAGTGGATTGTCCCAGGAGGAGGAATGG
AGCCTGAGGAGGAGCCCGGCGGTGCTGCTGTGAGGGAAGTCTATGAGGAGGCTGGAGTCAGAGGAAAATTAGGCAGACTT
CTGGGCATATTTGAGCAGAATCAAGACCGAAAGCACAGAACATATGTTTATGTTCTTACAGTCACTGAAATACTAGAAGA
TTGGGAAGATTCTGTTAATATAGGAAGGAAGAGAGAGTGGTTCAAGGTGGAAGATGCCATCAAAGTCCTCCAGTGTCATA
AGCCTGTGCATGCCGAGTATCTGGAAAAACTCAAGCTGGGTTGTTCCCCAACCAATGGCAATTCCACAGTCCCCTCCCTT
CCAGAGAGTAATGCCTTGTTTGTAACCGCCGCACAGACCTCCGGGCTGCCCTCTAGTGTAAGATAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009844 ortholog_one2one 2 retrogenes
retro_amel_1401, retro_amel_36,
Dasypus novemcinctus ENSDNOG00000015207 ortholog_one2one 3 retrogenes
retro_dnov_1906, retro_dnov_2555, retro_dnov_41,
Dipodomys ordii ENSDORG00000000647 ortholog_one2one 3 retrogenes
retro_dord_26, retro_dord_272, retro_dord_660,
Equus caballus ENSECAG00000019319 ortholog_one2one 1 retrogene
retro_ecab_472,
Echinops telfairi ENSETEG00000013922 ortholog_one2one 2 retrogenes
retro_etel_1627, retro_etel_2111,
Gorilla gorilla ENSGGOG00000014324 ortholog_one2one 1 retrogene
retro_ggor_108,
Loxodonta africana ENSLAFG00000013776 ortholog_one2one 1 retrogene
retro_lafr_1131,
Microcebus murinus ENSMICG00000007100 ortholog_one2one 2 retrogenes
retro_mmur_1521, retro_mmur_1565,
Myotis lucifugus ENSMLUG00000002767 ortholog_one2one 1 retrogene
retro_mluc_753,
Monodelphis domestica ENSMODG00000009468 ortholog_one2many 1 retrogene
retro_mdom_214,
Mus musculus ENSMUSG00000020029 ortholog_one2one 3 retrogenes
retro_mmus_1201, retro_mmus_1202, retro_mmus_1203,
Oryctolagus cuniculus ENSOCUG00000011283 ortholog_one2one 1 retrogene
retro_ocun_1905,
Pteropus vampyrus ENSPVAG00000013730 ortholog_one2one 1 retrogene
retro_pvam_1423,
Ictidomys tridecemlineatus ENSSTOG00000020306 ortholog_one2one 1 retrogene
retro_itri_112,
Tursiops truncatus ENSTTRG00000003309 ortholog_one2one 2 retrogenes
retro_ttru_1625, retro_ttru_1925,
Vicugna pacos ENSVPAG00000002957 ortholog_one2one 1 retrogene
retro_vpac_507,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_1705 78.14 100.00
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2. retro_tbel_2322 55.56 68.51
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3. retro_tbel_3443 85.16 100.00
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4. retro_tbel_3472 82.97 100.00
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5. retro_tbel_3733 76.50 100.00
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6. retro_tbel_3739 83.61 100.00
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7. retro_tbel_4678 83.15 100.00
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Download FASTA sequences of all ENSTBEG00000012198 retrocopies