Parental gene:

DNAJA4, ENSTBEG00000009268

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily A, member 4 [Source:HGNC Symbol;Acc:14885]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_4995:162373..166432(+)


>ENSTBEG00000009268
TTTAAACTCATATCCCAGGCATATGAAGTGCTTTCAGATCCCAAGAAAAGGGACATTTATGACCAGGGTGGAGAACAGGC
CATCAAAGAAGGAGGCTCGGGCAGCTCCAGCTTCTCGTCACCCATGGACATCTTCGACATGTTCTTTGGTGGTGGAGGAC
GGATGGCTAGAGAGAGAAGAGGCAAGAATGTGGTACACCAGTTGTCTGTAACTCTTGAAGATTTATATAACGGAGTCACA
AAGAAATTGGCTCTCCAGAAAAATGTAATTTGTGAAAAATGTGAAGGTGTTGGCGGGAAGAAGGGGTCGGTGGAGAAGTG
CCCTCTGTGCAAGGGTAGGGGGATGCAGGTCCACATCCAGCACATCGGGCCGGGCATGGTGCAGCAGATCCAGACCGTAT
GCATCGAGTGCAAGGGTCAGGGCGAGCGCATCAACCCCAAGGATCGCTGCGAGACGTGCAGCGGCGCCAAGGTGATCCGC
GAGAAGAAGATCATCGAGGTACACGTTGAGAAAGGTATGAAAGATGGGCAAAAGATACTATTTCATGAAGGAGATCAGGA
GCCTGAACTGGAGCCTGGTGATGTCATAATTGTGCTTGATCAGAAGGATCATAGTGTCTTTCAGAGGCGAGGCCACGACT
TGATCATGAAAATGAAAATTCAGCTCTCTGAAGCTCTCTGTGGCTTCAAGAAGACGATAAAAACACTGGATGATCGAATC
CTTGTTATCACATCCAAGTCA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012576 ortholog_one2one 1 retrogene
retro_amel_1659,
Dipodomys ordii ENSDORG00000005972 ortholog_one2one 4 retrogenes
retro_dord_245, retro_dord_280, retro_dord_333, retro_dord_533,
Echinops telfairi ENSETEG00000004320 ortholog_one2one 4 retrogenes
retro_etel_1010, retro_etel_1031, retro_etel_1067, retro_etel_608,
Macropus eugenii ENSMEUG00000015982 ortholog_one2one 4 retrogenes
retro_meug_1059, retro_meug_1893, retro_meug_292, retro_meug_624,
Microcebus murinus ENSMICG00000008789 ortholog_one2many 6 retrogenes
retro_mmur_1242, retro_mmur_1460, retro_mmur_39, retro_mmur_482, retro_mmur_496, retro_mmur_578,
Mus musculus ENSMUSG00000032285 ortholog_one2one 1 retrogene
retro_mmus_2632,
Otolemur garnettii ENSOGAG00000006752 ortholog_one2one 5 retrogenes
retro_ogar_1760, retro_ogar_1985, retro_ogar_221, retro_ogar_2656, retro_ogar_841,
Ochotona princeps ENSOPRG00000007594 ortholog_one2one 1 retrogene
retro_opri_1028,
Tupaia belangeri ENSTBEG00000000596 within_species_paralog 23 retrogenes
retro_tbel_1281, retro_tbel_134, retro_tbel_1529, retro_tbel_1542, retro_tbel_2260, retro_tbel_2293, retro_tbel_2316, retro_tbel_2428, retro_tbel_2445, retro_tbel_2917, retro_tbel_2965, retro_tbel_2972, retro_tbel_329, retro_tbel_3345, retro_tbel_3353, retro_tbel_3692, retro_tbel_4014, retro_tbel_4223, retro_tbel_432, retro_tbel_591, retro_tbel_617, retro_tbel_634, retro_tbel_842,
Tarsius syrichta ENSTSYG00000008600 ortholog_one2one 1 retrogene
retro_tsyr_1752,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_772 61.66 77.73
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2. retro_tbel_796 61.32 84.62
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3. retro_tbel_2276 63.59 72.87
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4. retro_tbel_2308 73.97 87.85
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5. retro_tbel_2790 61.76 81.38
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6. retro_tbel_2831 52.56 60.73
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7. retro_tbel_3242 69.05 65.99
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8. retro_tbel_4322 63.97 97.57
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9. retro_tbel_4735 65.32 69.64
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Download FASTA sequences of all ENSTBEG00000009268 retrocopies