Parental gene:

DNAJA4, ENSETEG00000004320

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily A, member 4 [Source:HGNC Symbol;Acc:14885]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_6318:39552..47074(+)


>ENSETEG00000004320
TTTAAACTCATATCCCAGGCATACGAAGTGCTGTCAGACCCAAAGAAAAGGGACATTTATGACCAGGGCGGGGAGCAGGC
GATTAAAGAAGGTGGCTCTGGCAGCCCCAACTTCTCGTCACCCATGGACATCTTCGACATGTTCTTTGGCGGTGGAGGGC
GGATGGCTAGAGAGAGAAGAGGCAAGAATGTTGTACATCAGTTGTCTGTAACTCTTGAAGATTTATATAATGGAGTCACA
AAGAAATTGGCGCTCCAGAAAAATGTAATTTGTGAGAAATGTGAAGGTGTCGGGGGGAAGAAGGGCTCCGTGGAGAAGTG
CCCACTGTGCAAGGGGCGAGGCATGCAGATCCACATTCAGCAGATCGGGCCGGGCATGGTGCAGCAGATCCAGACTGTGT
GCATCGAGTGCAAGGGCCAGGGCGAGCGCATCAACCCCAGGGACCGCTGCGAGGGCTGCAGTGGCGCCAAGGTGGTCCGA
GAGAAGAAGCTTATCGAGGTGCACGTTGAAAAAGGTATGAAGGACGGGCAGAAGATACTGTTTCATGGAGAAGGCGACCA
GGAGCCTGAGCTGGAGCCTGGCGACGTTATAATCGTGCTCGATCAGAAGGATCACAGTGTCTTTCAGAGACAAGGCCACG
ATTTGATCGTGAAAATGAAAATTCAGCTCTCCGAGGCCCTTTGCGGCTTCAAGAAGACGATAAGCACCCTGGATGACCGC
ACCCTGGTCATCGCCTCCAAGTCAGGTGAGGTGATCAAGCACGGGGACCTGAAATGTGTGCGCAACGAAGGGATGCCCAT
CTACAAAGCTCCCCTGGAAAAGGGGACTCTGATCATACAGTTCTTAGTGCTCTTCCCGGAGCAGCAGTGGCTGCCTCCAG
AAAAGCTTCCTCAGCTGGAAGCCTTGCTCCCCCCTCGACAGAAAGTGAAGATCGCAGACGACATGGATCAGGTGGAGCTG
ATGGAGTTCAGTCCCAACGAGCACAACTGGCGCCAACACAGGGAGGCCTACGAGGAGGACGACGACGGGCCCCGGGCCGG
AGTGCAGTGCCAGACGGCCTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012576 ortholog_one2one 1 retrogene
retro_amel_1659,
Dipodomys ordii ENSDORG00000005972 ortholog_one2one 4 retrogenes
retro_dord_245, retro_dord_280, retro_dord_333, retro_dord_533,
Echinops telfairi ENSETEG00000016984 within_species_paralog 6 retrogenes
retro_etel_1015, retro_etel_1454, retro_etel_1751, retro_etel_219, retro_etel_482, retro_etel_623,
Macropus eugenii ENSMEUG00000015982 ortholog_one2one 4 retrogenes
retro_meug_1059, retro_meug_1893, retro_meug_292, retro_meug_624,
Microcebus murinus ENSMICG00000008789 ortholog_one2many 6 retrogenes
retro_mmur_1242, retro_mmur_1460, retro_mmur_39, retro_mmur_482, retro_mmur_496, retro_mmur_578,
Mus musculus ENSMUSG00000032285 ortholog_one2one 1 retrogene
retro_mmus_2632,
Otolemur garnettii ENSOGAG00000006752 ortholog_one2one 5 retrogenes
retro_ogar_1760, retro_ogar_1985, retro_ogar_221, retro_ogar_2656, retro_ogar_841,
Ochotona princeps ENSOPRG00000007594 ortholog_one2one 1 retrogene
retro_opri_1028,
Tupaia belangeri ENSTBEG00000009268 ortholog_one2one 9 retrogenes
retro_tbel_2276, retro_tbel_2308, retro_tbel_2790, retro_tbel_2831, retro_tbel_3242, retro_tbel_4322, retro_tbel_4735, retro_tbel_772, retro_tbel_796,
Tarsius syrichta ENSTSYG00000008600 ortholog_one2one 1 retrogene
retro_tsyr_1752,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_608 70.99 100.00
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2. retro_etel_1010 62.37 81.02
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3. retro_etel_1031 51.03 54.39
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4. retro_etel_1067 67.86 86.40
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Download FASTA sequences of all ENSETEG00000004320 retrocopies