Parental gene:

RAB1A, ENSSTOG00000020693

Aliases:None
Description:RAB1A, member RAS oncogene family [Source:HGNC Symbol;Acc:9758]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393301.1:9859537..9891486(-)


>ENSSTOG00000020693
ATGTCCAGCATGAATCCCGAATATGATTATTTATTCAAGTTACTTCTGATTGGCGACTCTGGGGTTGGAAAGTCTTGCCT
CCTTCTTAGGTTTGCAGATGACACATATACAGAAAGCTACATCAGCACAATTGGTGTGGATTTCAAAATAAGAACTATAG
AGTTAGATGGGAAAACAATCAAGCTTCAAATATGGGACACAGCAGGCCAAGAAAGATTTCGAACAATCACCTCCAGTTAT
TACAGAGGAGCCCATGGCATCATAGTTGTGTATGATGTGACAGATCAGGAGTCCTTCAATAATGTTAAACAGTGGCTGCA
GGAAATAGATCGTTACGCTAGTGAAAATGTCAACAAGTTGTTGGTAGGGAACAAATGTGATCTGACCACAAAGAAAGTAG
TAGACTACACAACAGCAAAGGAATTTGCTGATTCCCTTGGAATCCCATTTTTGGAAACCAGTGCTAAGAACGCAACGAAT
GTAGAACAGTCTTTCATGACGATGGCAGCTGAGATTAAAAAGCGAATGGGCCCTGGAGCAACAGCTGGTGGCGCAGAGAA
GTCCAATGTTAAAATTCAGAGCACTCCAGTCAAGCAGTCAGGTGGAGGTTGCTGCTAA

Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000002205 ortholog_one2one 2 retrogenes
retro_etel_1687, retro_etel_413,
Homo sapiens ENSG00000138069 ortholog_one2one 2 retrogenes
retro_hsap_2362, retro_hsap_3626,
Macaca mulatta ENSMMUG00000021721 ortholog_one2one 1 retrogene
retro_mmul_951,
Oryctolagus cuniculus ENSOCUG00000017003 ortholog_one2one 1 retrogene
retro_ocun_800,
Pongo abelii ENSPPYG00000012360 ortholog_one2one 1 retrogene
retro_pabe_2135,
Pan troglodytes ENSPTRG00000011989 ortholog_one2one 1 retrogene
retro_ptro_1727,
Rattus norvegicus ENSRNOG00000004992 ortholog_one2one 1 retrogene
retro_rnor_110,
Ictidomys tridecemlineatus ENSSTOG00000011052 within_species_paralog 1 retrogene
retro_itri_1677,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1541 85.80 85.37
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Download FASTA sequences of all ENSSTOG00000020693 retrocopies