Parental gene:

RAB1B, ENSPPYG00000012360

Aliases:None
Description:ras-related protein Rab-1B [Source:RefSeq peptide;Acc:NP_001127221]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:45702575..45746979(+)


>ENSPPYG00000012360
ATGTCTTGTTTACATCCTCCCAATGATTATTTATTCAAGTTACTTCTGATTGGCGACTCAGGGGTTGGAAAGTCTTGCCT
TCTTCTTAGGTTTGCAGATGATACATATACAGAAAGCTACATCAGCACAATTGGTGTGGATTTCAAAATAAGAACTATAG
AGTTAGACGGGAAAACAATCAAGCTTCAAATATGGGACACAGCAGGCCAGGAAAGATTTCGAACAATCACCTCCAGTTAT
TACAGAGGAGCCCATGGCATCATAGTTGTGTATGATGTGACAGATCAGGAGTCCTTCAATAATGTTAAACAGTGGCTGCA
GGAAATAGATCGTTATGCCAGTGAAAATGTCAACAAATTGTTGGTAGGGAACAAATGTGATCTGACCACAAAGAAAGTAG
TAGACTACACAACAGCAAAGGAATTTGCTGATTCCCTTGGAATTCCGTTTTTGGAAACCAGTGCTAAGAATGCAACAAAT
GTAGAACAGTCTTTCATGACGATGGCAGCTGAGATTAAAAAGCGAATGGGTCCCGGAGCAACAGCGGGTGGTGCTGAGAA
GTCCAATGTTAAAATTCAGAGCACTCCGGTCAAGCAGTCAGGTGGAGGTTGCTGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 120 .59 RPM
SRP007412_cerebellum 108 .10 RPM
SRP007412_heart 56 .81 RPM
SRP007412_kidney 127 .18 RPM
SRP007412_liver 129 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000002205 ortholog_one2one 2 retrogenes
retro_etel_1687, retro_etel_413,
Homo sapiens ENSG00000138069 ortholog_one2one 2 retrogenes
retro_hsap_2362, retro_hsap_3626,
Macaca mulatta ENSMMUG00000021721 ortholog_one2one 1 retrogene
retro_mmul_951,
Oryctolagus cuniculus ENSOCUG00000017003 ortholog_one2one 1 retrogene
retro_ocun_800,
Pongo abelii ENSPPYG00000003031 within_species_paralog 1 retrogene
retro_pabe_3386,
Pan troglodytes ENSPTRG00000011989 ortholog_one2one 1 retrogene
retro_ptro_1727,
Rattus norvegicus ENSRNOG00000004992 ortholog_one2one 1 retrogene
retro_rnor_110,
Ictidomys tridecemlineatus ENSSTOG00000020693 ortholog_one2one 1 retrogene
retro_itri_1541,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2135 88.68 77.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPPYG00000012360 retrocopies