Parental gene:

MRPL17, ENSSSCG00000024693

Aliases:None
Description:mitochondrial ribosomal protein L17 [Source:HGNC Symbol;Acc:14053]
Organism:Pig (Sus scrofa)
Coordinates:9:3733326..3737898(+)


>ENSSSCG00000024693
ATGCGGCTGTCGGTGGCCGCCGCCATCTCCCACGGCCGCGTCTTCCGCCGCCTGGGCCTTGGTCCCGAGTCCCGCATCCA
CCTGTTGCAGAACTTGCTTACGGGACTGGTGCGACACGAACGCATCGAGGCGTCATGGGCACGCGTGGACGAGCTGAGGG
GCTACGCGGAGAAGCTCATCGACTATGGGAAGCTGGGAGACACCAACGAACGAGCCATGCGCATGGCTGACTTCTGGCTC
ACGGAGAAAGACTTGATCCCAAAGCTGTTTCAAGTACTGGCCCCTCGGTTCCAAGGTCAGAATGGGGGCTACACGAGAAT
GCTGCAGATCCCAAATCGGAATGAGCAGGATCGGGCCAAGATGGCAGTGATCGAGTATAAAGGGAACTGTCTGCCACCTT
TGCCCCTGCCTCGCAGGGACAGCAACCTTACACTCCTAAACCAACTACTCCAGGGACTGCGGCAGGACCAGGAAGCAAGC
AGCCACACAGCTCAAACACCAGCAGTTTAA

Library Parental gene expression (RPM)
SRP014902_placenta 65 .44 RPM
SRP014902_testis 50 .92 RPM
SRP018288_heart 41 .31 RPM
SRP018288_kidney 49 .35 RPM
SRP018288_liver 23 .51 RPM
SRP018288_lung 28 .31 RPM
SRP018856_adipose 72 .12 RPM
SRP035408_brain 56 .76 RPM
SRP035408_liver 33 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000027536 ortholog_one2one 1 retrogene
retro_cpor_1430,
Macropus eugenii ENSMEUG00000013588 ortholog_one2one 1 retrogene
retro_meug_1822,
Myotis lucifugus ENSMLUG00000001144 ortholog_one2one 2 retrogenes
retro_mluc_2368, retro_mluc_679,
Mustela putorius furo ENSMPUG00000005449 ortholog_one2many 1 retrogene
retro_mputfur_125,
Rattus norvegicus ENSRNOG00000019497 ortholog_one2one 1 retrogene
retro_rnor_1979,
Ictidomys tridecemlineatus ENSSTOG00000003313 ortholog_one2one 3 retrogenes
retro_itri_1019, retro_itri_1156, retro_itri_240,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_217 80.15 77.51
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Download FASTA sequences of all ENSSSCG00000024693 retrocopies