Parental gene:

Rcc1, ENSRNOG00000050106

Aliases:None
Description:regulator of chromosome condensation [Source:RefSeq peptide;Acc:NP_001121661]
Organism:Rat (Rattus norvegicus)
Coordinates:5:154176777..154193158(-)


>ENSRNOG00000050106
ATGCCACCCAAGCGCATAGCTAAGAGAAGGTCACCCCCAGAAGATGCTATCCCCAAAAGCAAGAAGGTGAAAGTCTCACA
CAGGTCCCACAACACAGAACCAGGCTTGGTGCTGACATTGGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGAGAGTG
TGCTGGAGAGGAAGAAGCCGGCCTTGGTACCCCTTCTACAGGATGTTGTGCAGGCCGAGGCCGGGGGCATGCACACTGTG
TGTCTGAGCCAAAGTGGCCAGGTCTACTCCTTTGGCTGCAATGACGAGGGTGCCCTGGGAAGGGACACCTCAGTCGAGGG
CTCCGAGATGGTCCCCGGGAAAGTGGAACTACAAGAGAAAGTGGTGCAAGTGTCAGCGGGAGACAGTCACACAGCAGCTC
TCACTGAAGACGGCCGAGTCTTCCTCTGGGGCTCTTTCCGGGACAATAATGGTGTGATCGGGTTGTTGGAGCCCATGAAG
AAGAGCATGGTGCCTGTGCAGGTGCAGCTGGACACGCAGGTGGTAAAGGTAGCCTCGGGGAACGACCACTTGGTGATGCT
CACAACTGATGGAGATCTCTACACCTTGGGCTGTGGGGAGCAAGGTCAGCTGGGCCGTGTGCCTGAGTTATTTGCCAACC
GAGGTGGCCGTCAGGGCCTTGAGCGACTCCTAGTCCCCAGGTGTGTGCTGCTGAAGTCCCGGGGAACGCGGGGCCGCGTG
CGGTTCCAGGATGCCTTCTGTGGCGCCTATTTCACCTTCGCCATCTCCCGTGAGGGCCATGTGTATGGCTTTGGCCTCTC
CAACTATCACCAGCTCGGAACTCCAGGCACTGGGTCTTGCTTCATTCCTCAAAACTTGACATCCTTCAAGAATTCCACCA
AGTCCTGGGTGGGCTTCTCTGGTGGCCAGCATCATACAGTCTGCATGGATTCAGAAGGAAAAGCATACAGCCTGGGCCGG
GCTGAGTACGGGCGGCTGGGCCTTGGGGAGGGTGCTGAGGAGAAGAGCATACCCACCCTCATTTCCCGGCTACCGGTGGT
CTCCTCAGTGGCCTGTGGGGCTTCAGTGGGGTACGCTGTGTCCAAGGATGGTCGTGTTTTTGCCTGGGGCATGGGCACCA
ACTACCAACTGGGCACCGGGCAGGAGGACGATGCCTGGAGCCCGGTGGAGATGACTGGCAAACAGCTGGAGAACCGTGAG
GTGTTAACGGTGTCCAGTGGGGGCCAGCACACAGTCTTACTAGTTAAGGACAAGACCCAAAGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 6 .25 RPM
SRP017611_kidney 9 .70 RPM
SRP017611_liver 4 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009686 ortholog_one2one 3 retrogenes
retro_cjac_2440, retro_cjac_3424, retro_cjac_3856,
Erinaceus europaeus ENSEEUG00000004565 ortholog_one2one 1 retrogene
retro_eeur_418,
Myotis lucifugus ENSMLUG00000017075 ortholog_one2one 1 retrogene
retro_mluc_2278,
Rattus norvegicus ENSRNOG00000006327 within_species_paralog 1 retrogene
retro_rnor_1378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2886 83.76 63.66
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Download FASTA sequences of all ENSRNOG00000050106 retrocopies