Parental gene:

Exosc1, ENSRNOG00000048708

Aliases:None
Description:exosome component 1 [Source:MGI Symbol;Acc:MGI:1913833]
Organism:Rat (Rattus norvegicus)
Coordinates:1:268622700..268632262(-)


>ENSRNOG00000048708
ATGGCACCACCTGTGAGGTACTGCATCCCGGGCGAACGTCTGTGTAACTTGGAGGAAGGCAGCCCGGGCAGCGGCACCTA
CACCCGGCACGGCTACATCTTTTCGTCGCTGGCTGGCTGCCTGACGAAGACCAGCGAGAATGGCGCGCTTCCCGTGGTAT
CAGTAATGAGAGAGACAGAGTCCCAGTTACTTCCAGATGTGGGAGCTGTCGTCACCTGTAAGGTCTCTAGCATCAACTCA
CGTTTTGCCAAAGTACACATCCTGTATGTAGGATCGACACCACTTAAAAATGCTTTTCGGGGAACTATCCGCAAGGAAGA
TATTCGAGCAACTGAAAAAGACAAGGTAGAAATTTACAAGAGTTTCCGGCCAGGTGATATAGTTTTGGCCAAAGTTATCT
CCCTAGGTGATGCACAGTCCAATTACCTGCTGACGACTGCTGAAAATGAGTTAGGGGTTGTGGTGGCCCACAGTGAGTCA
GGTGTCCAGATGGTCCCCATCAGCTGGTGTGAGATGCAGTGCCCCAAGACCCACACTAAAGAATTCCGAAAAGTAGCCAG
AGTACAGCCTGAGTTCTTACAAACCTGA

Library Parental gene expression (RPM)
SRP017611_brain 7 .55 RPM
SRP017611_kidney 4 .47 RPM
SRP017611_liver 4 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006477 ortholog_one2one 1 retrogene
retro_chof_2075,
Dasypus novemcinctus ENSDNOG00000007983 ortholog_one2many 1 retrogene
retro_dnov_104,
Erinaceus europaeus ENSEEUG00000005647 ortholog_one2one 3 retrogenes
retro_eeur_270, retro_eeur_438, retro_eeur_464,
Macropus eugenii ENSMEUG00000002246 ortholog_one2one 2 retrogenes
retro_meug_1799, retro_meug_951,
Myotis lucifugus ENSMLUG00000009228 ortholog_one2one 1 retrogene
retro_mluc_1563,
Mus musculus ENSMUSG00000034321 ortholog_one2one 1 retrogene
retro_mmus_691,
Oryctolagus cuniculus ENSOCUG00000011898 ortholog_one2many 1 retrogene
retro_ocun_173,
Otolemur garnettii ENSOGAG00000016259 ortholog_one2one 1 retrogene
retro_ogar_2496,
Pteropus vampyrus ENSPVAG00000003372 ortholog_one2one 1 retrogene
retro_pvam_686,
Ictidomys tridecemlineatus ENSSTOG00000006615 ortholog_one2one 1 retrogene
retro_itri_1253,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_899 55.45 55.90
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Download FASTA sequences of all ENSRNOG00000048708 retrocopies