Parental gene:

Prmt1, ENSRNOG00000026109

Aliases:Prmt1, Hrmt1l2
Description:Protein arginine N-methyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q63009]
Organism:Rat (Rattus norvegicus)
Coordinates:1:102035575..102044782(-)


>ENSRNOG00000026109
ATGGCGGCAGCCGAGGCCGCGAACTGCATCATGGAGGTTTCCTGTGGCCAAGCAGAAAGTAGTGAGAAGCCCAATGCTGA
GGACATGACATCCAAAGACTACTACTTTGACTCCTATGCCCACTTTGGCATCCACGAGGAGATGCTAAAGGATGAGGTGC
GAACCCTCACGTACCGCAACTCCATGTTTCACAATCGGCATCTCTTCAAAGACAAGGTGGTGCTGGATGTGGGCTCGGGC
ACTGGCATCCTCTGCATGTTCGCTGCCAAGGCAGGGGCCCGCAAGGTCATTGGGATCGAGTGCTCCAGTATCTCTGATTA
TGCTGTGAAGATTGTCAAAGCCAATAAGTTAGACCACGTGGTGACCATCATCAAGGGCAAGGTGGAGGAGGTGGAGCTGC
CTGTGGAGAAGGTGGACATCATCATCAGCGAGTGGATGGGTTATTGCCTCTTCTATGAGTCCATGCTCAACACTGTGCTG
CACGCTCGTGACAAGTGGCTGGCACCTGATGGCCTCATCTTCCCAGACCGAGCCACCCTGTATGTGACAGCCATTGAGGA
CCGACAGTATAAAGACTACAAGATCCACTGGTGGGAGAATGTATATGGCTTTGATATGTCCTGCATTAAAGACGTGGCCA
TCAAGGAGCCCCTGGTGGACGTGGTGGACCCAAAGCAGCTGGTCACCAACGCCTGCCTCATAAAGGAGGTGGACATCTAC
ACAGTCAAGGTGGAGGACCTGACCTTCACCTCCCCGTTTTGTCTGCAAGTGAAGAGGAATGACTATGTGCATGCACTAGT
GGCCTACTTCAACATCGAGTTCACCCGATGCCACAAGAGGACCGGCTTCTCTACCAGTCCTGAGTCTCCATACACACATT
GGAAGCAGACTGTGTTCTACATGGAGGACTACCTAACAGTGAAGACCGGCGAGGAGATTTTTGGCACTATTGGAATGAGG
CCCAACGCCAAAAACAATCGTGACTTGGACTTTACCATCGACCTGGACTTCAAGGGTCAGCTGTGTGAGCTCTCTTGTTC
CACCGACTACCGGATGCGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 20 .56 RPM
SRP017611_kidney 14 .72 RPM
SRP017611_liver 4 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000003670 possible_ortholog 3 retrogenes
retro_cjac_1800, retro_cjac_1979, retro_cjac_764,
Danio rerio ENSDARG00000010246 ortholog_one2many 1 retrogene
retro_drer_7,
Felis catus ENSFCAG00000006081 ortholog_one2one 1 retrogene
retro_fcat_1762,
Homo sapiens ENSG00000126457 ortholog_one2one 1 retrogene
retro_hsap_3406,
Gasterosteus aculeatus ENSGACG00000004897 ortholog_one2many 1 retrogene
retro_gacu_2,
Gorilla gorilla ENSGGOG00000000503 ortholog_one2one 1 retrogene
retro_ggor_2305,
Macaca mulatta ENSMMUG00000003029 ortholog_one2one 1 retrogene
retro_mmul_2121,
Otolemur garnettii ENSOGAG00000011938 ortholog_one2one 2 retrogenes
retro_ogar_2471, retro_ogar_2929,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1077 99.72 100.00
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2. retro_rnor_2668 71.54 68.27
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Download FASTA sequences of all ENSRNOG00000026109 retrocopies