Parental gene:

Ccnb1ip1, ENSRNOG00000026056

Aliases:None
Description:E3 ubiquitin-protein ligase CCNB1IP1 [Source:RefSeq peptide;Acc:NP_001020312]
Organism:Rat (Rattus norvegicus)
Coordinates:15:31552647..31566210(-)


>ENSRNOG00000026056
ATGTCTTTGTGTGAAGACATGTTGCTGTGCAATTATCGGAAGTGTCGTATCAAGCTCTCTGGCTATGCTTGGGTCACGGC
CTGCTCTCACATCTTCTGTGATCAGCATGGCAGTGGTGAGTTCAGTCATTCACCAGCAATCTGCCCTGCTTGCAACAGCA
CCCTTTCTGGAAAGCTAGACATTGTCCGGACAGAGCTCAGTCCGTCAGAGGAGTACAAAGCTATGGTATTGGCAGGGCTT
CGACCCGAGGTTGTTTTGGACATTAGCTCCCGAGCATTGGCCTTCTGGACGTACCAGGTGCACCAGGAACGTCTCTATCA
AGAATACAATTTCAGCAAGGCTGAGAACCACTTAAAACAGATGGAGAAGATATACACGCAGCAAATACAGAGCAAGGACG
TAGAATTGACCTCTATGAAAGGGGAGGTTACCTCCATGAAGAAAGTTCTGGAGGAATACAAGAAGAAGTTTAGTGATATC
TCTGAGAAACTGATGGAGCGCAACCGCCAATACCAAAAGCTCCAAGGCCTTTATGATAGCCTCAGGCTAAGGAATATCAC
TATCGCTAGCCAGGAGGGCTCCCTGGAACCAGCTATGATCCCACAGTCTGGAGTCTTTGGCTTCCCATCAGGGAATAGCT
CAAAGTTTTCTTTGGACCATACACCAGCTGGAAATCAAGGTGGTGGAGATGAAGATGTTCAGTTCAGACCATTTTTTGTG
TGTTCTCCCACAGCACCTGAACCTGTTAACAACTTCTTTAGTTTTGCGTCTCAAAGCCATGAAGCAGAGCAGCAAGTCTG
CAGCAGGGCCTTTAAAGCAAAAAGAATTTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .14 RPM
SRP017611_kidney 0 .49 RPM
SRP017611_liver 0 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009967 ortholog_one2one 2 retrogenes
retro_cjac_3244, retro_cjac_4197,
Homo sapiens ENSG00000100814 ortholog_one2one 1 retrogene
retro_hsap_4877,
Gorilla gorilla ENSGGOG00000004586 ortholog_one2one 1 retrogene
retro_ggor_3046,
Microcebus murinus ENSMICG00000000893 ortholog_one2one 2 retrogenes
retro_mmur_1264, retro_mmur_1551,
Macaca mulatta ENSMMUG00000016251 ortholog_one2one 2 retrogenes
retro_mmul_2617, retro_mmul_371,
Nomascus leucogenys ENSNLEG00000010636 ortholog_one2one 1 retrogene
retro_nleu_2556,
Pan troglodytes ENSPTRG00000006088 ortholog_one2one 1 retrogene
retro_ptro_3249,
Ictidomys tridecemlineatus ENSSTOG00000004394 ortholog_one2one 1 retrogene
retro_itri_1590,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_842 76.60 67.75
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Download FASTA sequences of all ENSRNOG00000026056 retrocopies