Parental gene:

Mthfd2, ENSRNOG00000010833

Aliases:None
Description:bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial [Source:RefSeq peptide;Acc:NP_001102868]
Organism:Rat (Rattus norvegicus)
Coordinates:4:179592813..179604331(-)


>ENSRNOG00000010833
ATGGTTTCTGTTTCCTTGTCTGCGCTGGCAGTGCGGTTGTTGCGCCCCACGCACGGCTGCCACTCCCGCCTACAGTCCTT
CCACCTGGCGGCAGTACGAAATGAAGCCGTGGTCATTTCTGGAAGGAAGCTGGCCCAGCAGATTAAGCAAGAAGTACGGC
AGGAGGTGGAAGAGTGGGTGGCCTCGGGCAACAAGCGGCCACACCTCAGTGTCATTCTGGTTGGCGACAATCCTGCCAGT
CACTCCTATGTTCTCAACAAAACCAGGGCAGCAGCTGAAGTGGGAATCAACAGTGAGACAATTGTGAAACCAGCCTCAGT
GTCAGAGGAAGAGCTGTTGAATTCAATCAGGACATTGAATGACGATGAGAATGTAGATGGCCTCCTTGTTCAGCTGCCAC
TCCCAGAGCACATTGACGAGAGAAAGATCTGCAATGCTGTTTCTCCTGACAAGGATGTTGATGGCTTTCATGTCATCAAC
GTTGGGCGCATGTGTTTGGACCAGTATTCCATGCTGCCAGCAACTCCATGGGGCGTGTGGGAGATACTCAAGCGAACAGG
CATTCCAACCTTAGGGAAGAATGTGGTAGTGGCTGGCAGGTCCAAAAACGTTGGGATGCCAATTGCAATGCTGCTGCACA
CGGATGGGGCACACGAGCGGCCTGGGGGTGATGCCACAGTCACAATATCTCATCGGCACACTCCCAAAGAACAGCTGAAG
AAGCACACGATCCTTGCGGACATTGTGATATCTGCTGCTGGCATTCCAAACCTCATCACAGCTGACATGATCAAGGAAGG
AGCAACAGTCATCGACGTGGGGATAAACAGAGTTCAAGATCCTGTCACCGCAAAGCCCAAGTTGGTTGGAGATGTGGATT
TTGAAGGAGTCAAGAAGAAAGCTGGTTACATCACTCCTGTCCCTGGGGGTGTTGGTCCCATGACAGTGGCCATGCTCATG
AAGAACACCATTATTGCTGCAAAGAAAGTGCTCAGGCCAGAGGAGCTGGAAGTGTTGAAGTCCACACAGCGCGGAGTTGC
CACCAACTAG

Library Parental gene expression (RPM)
SRP017611_brain 3 .45 RPM
SRP017611_kidney 1 .88 RPM
SRP017611_liver 0 .34 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017345 possible_ortholog 2 retrogenes
retro_amel_1098, retro_amel_1584,
Canis familiaris ENSCAFG00000008716 possible_ortholog 1 retrogene
retro_cfam_580,
Callithrix jacchus ENSCJAG00000017810 possible_ortholog 3 retrogenes
retro_cjac_2225, retro_cjac_2568, retro_cjac_3078,
Macropus eugenii ENSMEUG00000013987 ortholog_one2one 4 retrogenes
retro_meug_1468, retro_meug_152, retro_meug_1577, retro_meug_2074,
Pongo abelii ENSPPYG00000012283 possible_ortholog 3 retrogenes
retro_pabe_2271, retro_pabe_2729, retro_pabe_3077,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2170 93.77 73.64
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Download FASTA sequences of all ENSRNOG00000010833 retrocopies