Parental gene:

Sept7, ENSRNOG00000006545

Aliases:Sept7, Cdc10
Description:septin-7 isoform a [Source:RefSeq peptide;Acc:NP_072138]
Organism:Rat (Rattus norvegicus)
Coordinates:8:26435006..26498715(+)


>ENSRNOG00000006545
ATGTCGGTCAGTGCGAGATCCGCTGCTGCTGAGGAGAGGAGCGTCAACTGCAGCACCATGGGGTCTCAACCGAAGAACCT
TGAGGGCTATGTGGGATTTGCCAACCTCCCAAATCAAGTGTACAGAAAATCGGTGAAAAGAGGATTTGAATTCACTCTTA
TGGTAGTAGGTGAATCTGGACTGGGAAAGTCGACATTAATCAACTCATTATTCCTCACAGATTTGTATTCTCCAGAGTAT
CCAGGACCTTCTCATAGAATCAAAAAGACTGTTCAGGTGGAGCAATCCAAAGTTTTAATCAAAGAAGGTGGCGTTCAGTT
GCTGCTGACGATAGTTGATACTCCGGGATTTGGAGATGCAGTGGATAATAGTAATTGCTGGCAGCCTGTTATCGACTACA
TTGATAGTAAATTTGAAGATTACTTAAATGCAGAATCTCGAGTGAACAGACGACAGATGCCTGATAACAGGGTGCAGTGT
TGTTTATACTTCATTGCTCCTTCAGGACATGGACTTAAACCATTGGATATTGAGTTTATGAAACGTTTGCATGAAAAAGT
GAATATCATTCCTTTAATTGCCAAAGCAGACACACTTACACCAGAGGAATGCCAACAGTTTAAAAAGCAGATAATGAAAG
AAATCCAAGAACATAAAATTAAAATATATGAATTTCCAGAAACGGATGATGAAGAAGAGAATAAGCTGGTTAAGAAGATA
AAGGACCGTTTACCTCTTGCTGTGGTGGGTAGTAATACTATCATTGAAGTTAATGGCAAAAGAGTCAGAGGAAGGCAGTA
TCCTTGGGGTGTGGCTGAAGTTGAAAATGGTGAGCATTGTGATTTTACAATTCTAAGAAATATGTTGATACGAACACACA
TGCAGGACTTGAAAGATGTTACCAATAACGTACACTATGAGAACTACAGAAGCAGAAAACTAGCAGCAGTGACCTACAAT
GGAGTAGATAACAACAAGAACAAAGGGCAACTTACCAAGAGCCCTCTGGCGCAGATGGAGGAGGAGAGAAGGGAGCACGT
GGCCAAGATGAAGAAGATGGAGATGGAGATGGAGCAGGTGTTTGAGATGAAGGTCAAGGAAAAAGTTCAAAAGCTGAAGG
ACTCTGAAGCCGAGCTCCAGCGGCGCCATGAGCAAATGAAAAAGAATTTAGAAGCACAGCACAAAGAATTAGAGGAAAAA
CGTCGTCAGTTTGAAGAAGAAAAAGCAAACTGGGAAGCTCAACAACGTATTTTAGAGCAACAGAATTCTTCAAGAACCTT
GGAAAAGAACAAGAAGAAAGGCAAGATCTTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 146 .38 RPM
SRP017611_kidney 37 .40 RPM
SRP017611_liver 17 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012276 ortholog_one2one 2 retrogenes
retro_cjac_1259, retro_cjac_3809,
Echinops telfairi ENSETEG00000015624 ortholog_one2one 3 retrogenes
retro_etel_1263, retro_etel_282, retro_etel_517,
Homo sapiens ENSG00000122545 ortholog_one2one 2 retrogenes
retro_hsap_3810, retro_hsap_4202,
Gorilla gorilla ENSGGOG00000001175 ortholog_one2one 1 retrogene
retro_ggor_2816,
Monodelphis domestica ENSMODG00000021167 ortholog_one2one 1 retrogene
retro_mdom_1672,
Nomascus leucogenys ENSNLEG00000001673 ortholog_one2one 1 retrogene
retro_nleu_2152,
Otolemur garnettii ENSOGAG00000006015 ortholog_one2one 1 retrogene
retro_ogar_1193,
Pongo abelii ENSPPYG00000017639 possible_ortholog 1 retrogene
retro_pabe_3438,
Pan troglodytes ENSPTRG00000019080 ortholog_one2one 2 retrogenes
retro_ptro_2585, retro_ptro_2853,
Rattus norvegicus ENSRNOG00000017952 within_species_paralog 1 retrogene
retro_rnor_1110,
Sarcophilus harrisii ENSSHAG00000003788 ortholog_one2one 1 retrogene
retro_shar_258,
Ictidomys tridecemlineatus ENSSTOG00000021378 ortholog_one2one 3 retrogenes
retro_itri_1332, retro_itri_1736, retro_itri_1771,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_821 95.00 54.92
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2. retro_rnor_1424 96.48 64.99
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3. retro_rnor_1425 95.43 95.19
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4. retro_rnor_1426 95.43 95.19
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5. retro_rnor_1427 95.43 95.19
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6. retro_rnor_1428 95.91 95.19
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7. retro_rnor_1431 95.67 95.19
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8. retro_rnor_1445 95.43 95.19
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9. retro_rnor_1446 96.48 64.99
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Download FASTA sequences of all ENSRNOG00000006545 retrocopies