Parental gene: | Ppp2ca, ENSRNOG00000005389 |
| Aliases: | Ppp2ca, Pp2a1 |
| Description: | Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform [Source:UniProtKB/Swiss-Prot;Acc:P63331] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:37324232..37343983(+) |
>ENSRNOG00000005389
ATGGACGAGAAGTTGTTCACCAAGGAGCTGGACCAGTGGATCGAGCAGCTGAACGAGTGCAAGCAGCTCTCCGAGTCCCA
GGTCAAGAGCCTCTGCGAGAAGGCTAAAGAAATCCTGACAAAAGAATCTAATGTTCAGGAGGTTCGATGTCCAGTCACTG
TGTGTGGAGATGTGCATGGGCAATTTCATGACCTCATGGAACTCTTTAGAATTGGTGGTAAATCACCAGATACAAATTAC
TTGTTTATGGGAGACTATGTGGACAGAGGATATTACTCAGTTGAAACAGTTACACTGCTTGTAGCTCTTAAGGTTCGTTA
CCGAGAGCGTATCACCATACTCCGAGGGAATCACGAGAGCAGACAGATCACACAAGTTTATGGTTTCTACGATGAGTGTT
TAAGGAAATACGGAAATGCAAATGTTTGGAAATACTTCACAGACCTTTTTGACTACCTTCCTCTCACTGCCTTGGTGGAT
GGGCAGATCTTCTGTCTACATGGTGGTCTTTCACCATCCATAGACACACTGGATCACATCCGAGCACTTGATCGCCTACA
AGAAGTTCCTCATGAGGGTCCAATGTGTGACTTGCTGTGGTCAGATCCAGATGACCGTGGTGGCTGGGGGATATCTCCTC
GGGGAGCTGGTTATACCTTTGGCCAAGATATTTCTGAGACATTTAATCATGCCAATGGCCTCACGTTGGTGTCCAGAGCT
CACCAGCTGGTGATGGAGGGATATAACTGGTGCCATGACCGGAATGTAGTAACAATTTTCAGTGCTCCAAACTATTGCTA
TCGTTGTGGTAACCAAGCTGCAATCATGGAACTTGATGACACTCTTAAGTATTCTTTCTTGCAGTTCGATCCAGCACCTC
GTAGAGGCGAGCCACATGTCACTCGTCGTACCCCAGACTACTTCCTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 64 .06 RPM |
| SRP017611_kidney | 45 .29 RPM |
| SRP017611_liver | 21 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002653 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013634 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000113575 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026729 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009695 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000016632 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000010560 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_817 | 99.35 | 100.00 | Please wait, loading  |
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| 2. | retro_rnor_1263 | 79.62 | 50.16 | Please wait, loading |
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| 3. | retro_rnor_1264 | 78.98 | 50.16 | Please wait, loading |
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| 4. | retro_rnor_1265 | 80.37 | 68.61 | Please wait, loading |
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| 5. | retro_rnor_1266 | 78.98 | 50.16 | Please wait, loading |
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Download FASTA sequences of all ENSRNOG00000005389 retrocopies