Parental gene:

Scoc, ENSRNOG00000003853

Aliases:None
Description:Short coiled-coil protein [Source:UniProtKB/Swiss-Prot;Acc:Q5RJZ6]
Organism:Rat (Rattus norvegicus)
Coordinates:19:35562897..35592442(-)


>ENSRNOG00000003853
ATGGACGGGTTGAACACAGGGGAGGAGGAAGACAGCGCATTCACCAGCATTTCTCTCACGGATGACACAGACCATTCATT
AAAGAGTTTGCATTCGGGAGCTGAACGTCTGTTCCCCAAGATGATGAATGCTGACATGGACGCAGTTGATGCTGAAAATC
AAGTGGAACTGGAAGAAAAGACTCGACTCATTAATCAGGTGTTGGAGCTCCAGCACACACTTGAAGATCTTTCTGCAAGA
GTAGATGCAGTTAAGGAAGAAAATCTGAAGCTAAAATCGGAAAATCAAGTTCTTGGACAATATATAGAAAACCTCATGTC
TGCTTCTAGTGTTTTTCAAACAACTGATACAAAAAGCAAAAGGAAGTAA

Library Parental gene expression (RPM)
SRP017611_brain 111 .58 RPM
SRP017611_kidney 63 .29 RPM
SRP017611_liver 12 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010957 possible_ortholog 2 retrogenes
retro_amel_176, retro_amel_725,
Callithrix jacchus ENSCJAG00000003060 possible_ortholog 2 retrogenes
retro_cjac_713, retro_cjac_95,
Erinaceus europaeus ENSEEUG00000011107 possible_ortholog 1 retrogene
retro_eeur_19,
Macropus eugenii ENSMEUG00000014534 ortholog_one2one 2 retrogenes
retro_meug_1580, retro_meug_823,
Monodelphis domestica ENSMODG00000025528 ortholog_one2one 2 retrogenes
retro_mdom_1163, retro_mdom_1265,
Mus musculus ENSMUSG00000063253 ortholog_one2one 2 retrogenes
retro_mmus_1639, retro_mmus_2306,
Oryctolagus cuniculus ENSOCUG00000006591 possible_ortholog 3 retrogenes
retro_ocun_1400, retro_ocun_1657, retro_ocun_429,
Sarcophilus harrisii ENSSHAG00000003474 ortholog_one2one 1 retrogene
retro_shar_572,
Tarsius syrichta ENSTSYG00000011814 possible_ortholog 6 retrogenes
retro_tsyr_1232, retro_tsyr_1446, retro_tsyr_1566, retro_tsyr_2025, retro_tsyr_34, retro_tsyr_446,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_609 70.00 81.15
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Download FASTA sequences of all ENSRNOG00000003853 retrocopies