Parental gene:

CTNNBL1, ENSPTRG00000023688

Aliases:CTNNBL1, PDGFRA
Description:Pan troglodytes catenin, beta like 1 (CTNNBL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001246652]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:20:34566663..34743788(+)


>ENSPTRG00000023688
ATGGACGTGGGCGAACTTCTGAGCTACCAGCCCAATAGGGGCACAAAACGTCCCCGGGATGATGAAGAGGAGGAGCAGAA
GATGCGTCGGAAACAAACTGGTACTCGAGAACGCGGCCGCTATCGGGAAGAAGAAATGACTGTGGTGGAGGAAGCGGATG
ATGACAAAAAAAGGCTGCTTCAGATTATTGACAGAGACGGGGAAGAGGAAGAGGAAGAGGAGGAGCCATTGGATGAAAGC
TCAGTGAAGAAAATGATCCTCACATTTGAAAAGAGATCATATAAAAACCAAGAATTGCGGATTAAGTTTCCAGACAATCC
AGAGAAGTTCATGGAATCCGAGCTGGACCTAAATGACATCATTCAGGAGATGCACGTAGTGGCCACCATGCCAGACCTGT
ACCACCTTCTGGTGGAGCTGAATGCTGTACAGTCGCTTCTCGGCTTGCTCGGACACGATAATACAGATGTGTCCATAGCT
GTGGTCGATTTGCTTCAGGAATTAACAGATATAGACACCCTCCATGAGAGTGAAGAGGGAGCAGAAGTGCTCATCGATGC
TCTGGTGGATGGGCAGGTGGTAGCACTGCTGGTACAGAATCTGGAGCGCCTGGATGAGTCTGTGAAAGAGGAGGCAGATG
GCGTCCACAACACTCTGGCTATTGTGGAAAACATGGCTGAGTTCCGGCCTGAGATGTGTACAGAGGGTGCCCAGCAGGGT
CTTCTACAGTGGCTGTTGAAGAGGCTGAAGGCAAAGATGCCTTTCGATGCCAACAAACTGTATTGCAGTGAAGTGCTGGC
CATATTGCTCCAGGACAATGATGAAAACAGGGAATTGCTTGGGGAGCTGGATGGAATCGATGTGCTTCTTCAGCAGTTAT
CCGTGTTTAAAAGACACAATCCCAGCACGGCTGAGGAGCAGGAGATGATGGAGAATCTGTTTGATTCCCTCTGCTCCTGT
CTAATGCTTAGTTCCAATCGTGAGCGCTTCCTGAAGGGCGAGGGTCTTCAGCTGATGAATCTCATGCTCAGGGAAAAGAA
GATCTCCCGGAGCAGTGCCCTGAAAGTGCTGGACCATGCCATGATTGGCCCTGAAGGCACAGACAACTGCCATAAGTTTG
TTGACATTCTTGGCTTAAGAACCATCTTTCCCCTCTTTATGAAATCTCCCAGGAAGATCAAGAAAGTGGGAACCACTGAG
AAGGAACATGAAGAGCATGTCTGTTCGATCCTGGCTTCCCTCCTGCGGAACCTGAGAGGGCAGCAGCGGACCCGGCTTCT
GAATAAATTCACTGAAAATGACAGTGAGAAGGTTGACAGACTAATGGAGTTGCATTTTAAATATCTGGGTGCAATGCAGG
TGGCGGACAAGAAGATTGAAGGGGAAAAACACGACATGGTCCGGCGAGGAGAGATCATCGACAATGACACCGAGGAGGAG
TTCTACCTCCGGCGCCTGGATGCGGGGCTCTTTGTTCTCCAGCACATCTGCTACATCATGGCCGAGATCTGCAATGCCAA
TGTCCCCCAGATTCGCCAGAGGGTTCACCAGATCCTAAACATGCGAGGAAGCTCCATCAAAATTGTCAGGCATATCATCA
AGGAGTATGCAGAGAACATCGGGGACGGCCGGAGCCCGGAGTTCCGGGAGAACGAGCAAAAGCGCATCCTGGGCTTGCTG
GAGAACTTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .74 RPM
SRP007412_cerebellum 36 .78 RPM
SRP007412_heart 27 .37 RPM
SRP007412_kidney 26 .18 RPM
SRP007412_liver 30 .54 RPM
SRP007412_testis 59 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000132792 ortholog_one2one 1 retrogene
retro_hsap_4819,
Gorilla gorilla ENSGGOG00000000614 ortholog_one2one 1 retrogene
retro_ggor_3003,
Macropus eugenii ENSMEUG00000013001 ortholog_one2one 1 retrogene
retro_meug_910,
Myotis lucifugus ENSMLUG00000015803 ortholog_one2many 1 retrogene
retro_mluc_177,
Macaca mulatta ENSMMUG00000017224 ortholog_one2one 1 retrogene
retro_mmul_2571,
Nomascus leucogenys ENSNLEG00000006291 ortholog_one2one 1 retrogene
retro_nleu_2194,
Pongo abelii ENSPPYG00000010989 ortholog_one2one 1 retrogene
retro_pabe_3747,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3208 80.33 95.56
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Download FASTA sequences of all ENSPTRG00000023688 retrocopies