Parental gene:

RARRES2, ENSPTRG00000019854

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:7:151503072..151506420(-)


>ENSPTRG00000019854
ATGCGACGGCTGCTGATCCCTCTGGCCCTGTGGCTGGGCGCGGTGGGCGTGGGCGTCGCCGAGCTCACGGAAGCCCAGCG
CCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTTCCAGGAGACCAGTGTGGAGA
GCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTTAAGCTGCAGCAGACAAGCTGCCGGAAGAGG
GACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGAGGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGA
GGACAAAGTTCTGGGCCGGTTGGTCCACTGCCCCATAGAGACCCAAGTTCTGCGGGAGGCTGAGGAGCACCAGGAGACCC
AGTGCCTCAGGGTGCAGCAGGCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTG
CCCCGCAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .65 RPM
SRP007412_cerebellum 12 .30 RPM
SRP007412_heart 4 .05 RPM
SRP007412_kidney 119 .75 RPM
SRP007412_liver 623 .85 RPM
SRP007412_testis 4 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010322 ortholog_one2one 5 retrogenes
retro_cjac_2100, retro_cjac_2706, retro_cjac_3874, retro_cjac_3904, retro_cjac_4141,
Homo sapiens ENSG00000106538 ortholog_one2one 13 retrogenes
retro_hsap_1678, retro_hsap_1679, retro_hsap_1680, retro_hsap_1681, retro_hsap_1682, retro_hsap_1683, retro_hsap_2665, retro_hsap_3134, retro_hsap_4327, retro_hsap_4330, retro_hsap_4332, retro_hsap_4792, retro_hsap_743,
Gorilla gorilla ENSGGOG00000011158 ortholog_one2one 1 retrogene
retro_ggor_2984,
Macaca mulatta ENSMMUG00000005232 ortholog_one2one 4 retrogenes
retro_mmul_1555, retro_mmul_1993, retro_mmul_2378, retro_mmul_2554,
Nomascus leucogenys ENSNLEG00000001362 ortholog_one2one 18 retrogenes
retro_nleu_1108, retro_nleu_1744, retro_nleu_2079, retro_nleu_2944, retro_nleu_2978, retro_nleu_2999, retro_nleu_3000, retro_nleu_3001, retro_nleu_3034, retro_nleu_3036, retro_nleu_3067, retro_nleu_3071, retro_nleu_3072, retro_nleu_3076, retro_nleu_3089, retro_nleu_3092, retro_nleu_3119, retro_nleu_3128,
Pongo abelii ENSPPYG00000018166 ortholog_one2one 28 retrogenes
retro_pabe_1382, retro_pabe_1383, retro_pabe_1384, retro_pabe_1386, retro_pabe_1387, retro_pabe_1423, retro_pabe_1424, retro_pabe_1425, retro_pabe_1426, retro_pabe_2404, retro_pabe_2591, retro_pabe_2593, retro_pabe_2595, retro_pabe_2596, retro_pabe_2597, retro_pabe_2600, retro_pabe_2604, retro_pabe_2605, retro_pabe_2606, retro_pabe_2608, retro_pabe_3540, retro_pabe_3558, retro_pabe_3559, retro_pabe_3604, retro_pabe_3727, retro_pabe_638, retro_pabe_639, retro_pabe_666,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1095 68.85 74.85
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2. retro_ptro_1096 59.06 75.46
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3. retro_ptro_1097 66.67 80.98
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4. retro_ptro_1098 74.31 65.64
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5. retro_ptro_1099 59.59 87.73
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6. retro_ptro_1100 65.14 65.03
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7. retro_ptro_1795 62.07 85.28
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8. retro_ptro_2942 62.86 83.44
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9. retro_ptro_3067 61.80 53.37
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10. retro_ptro_3188 59.87 95.71
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Download FASTA sequences of all ENSPTRG00000019854 retrocopies