Parental gene:

RNF5, ENSPTRG00000018010

Aliases:None
Description:ring finger protein 5, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:10068]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:32446060..32451089(+)


>ENSPTRG00000018010
ATGGCAGCAGCGGAGGAGGAGGACGGGGGCCCCGAAGGGCCAAATCGCGAGCGGGGCGGGGCGGGCGCGACCTTCGAATG
TAATATATGTTTGGAGACTGCTCGGGAAGCTGTGGTCAGTGTGTGTGGCCACCTGTACTGTTGGCCATGTCTTCATCAGT
GGCTGGAGACACGGCCAGAACGGCAAGAGTGTCCAGTATGTAAAGCTGGGATCAGCAGAGAGAAGGTTGTCCCGCTTTAT
GGGCGAGGGAGCCAGAAGCCCCAGGATCCCAGATTAAAAACTCCACCCCGCCCCCAGGGCCAGAGACCAGCTCCAGAGAG
CAGAGGGGGATTCCAGCCATTTGGTGATACCGGGGGCTTCCACTTCTCATTTGGTGTTGGTGCTTTTCCCTTTGGCTTTT
TCACCACCGTCTTCAATGCCCATGAGCCTTTCCGCCGGGGTACAGGGCCGTTTTCTACTTCTCCTGCTTTCTTCCACTAC
CTTATTGGGAACACCAGCCGTGAGTTCAGAGGCAGAATCTACAATTTCTGGCTTCCCAGGAATCTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .40 RPM
SRP007412_cerebellum 21 .54 RPM
SRP007412_heart 18 .42 RPM
SRP007412_kidney 46 .34 RPM
SRP007412_liver 28 .12 RPM
SRP007412_testis 6 .53 RPM



Species Parental gene accession Homology type Retrogenes number
Oryctolagus cuniculus ENSOCUG00000016417 ortholog_one2one 1 retrogene
retro_ocun_1241,
Otolemur garnettii ENSOGAG00000031466 ortholog_one2one 1 retrogene
retro_ogar_1951,
Oreochromis niloticus ENSONIG00000013523 ortholog_one2one 1 retrogene
retro_onil_48,
Ochotona princeps ENSOPRG00000004366 ortholog_one2one 2 retrogenes
retro_opri_166, retro_opri_667,
Ictidomys tridecemlineatus ENSSTOG00000024478 ortholog_one2one 1 retrogene
retro_itri_480,
Tupaia belangeri ENSTBEG00000016320 ortholog_one2one 1 retrogene
retro_tbel_2183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2740 98.33 100.00
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Download FASTA sequences of all ENSPTRG00000018010 retrocopies