Parental gene:

RNF5, ENSOCUG00000016417

Aliases:None
Description:ring finger protein 5, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:10068]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:12:20964762..20967221(+)


>ENSOCUG00000016417
AGCCGCCGAGGAGGAGGACGGGGGCCCGAAGGGCCAAACCGCGAGGGGGGCGGGGCGGGCGCGACCTTCGAATGTAATAT
ATGTTTGGAGACTGCTCGGGAAGCTGTGGTCAGTGTGTGTGGCCACCTGTACTGTTGGCCCTGTCTTCATCAGTGGCTGG
AGACCCGGCCGGAGCGGCAGGAGTGCCCTGTGTGTAAGGCCGGGATCAGCAGAGAGACCGTTGTCCCACTGTATGGGCGA
GGAAGCCAGAAGCCCCAGGATCCCAGATTGAAAACTCCGCCTCGCCCCCAGGGCCAGCGACCGGCTCCGGAGAGCAGAGG
GGGATTCCAGCCATTTGGCGACACCGGGGGCTTCCACTTCTCGTTCGGCGTTGGTGCTTTTCCCTTCGGCTTTTTCACCA
CCGTCTTCAACACCCATGAGCCTTCCCGCCGGGGTGCAGGTGTGGATCTGGGACAGGGGCACCCGGCCTCCAGCTGGCAG
GATTCCCTCTTCCTGTTTCTCGCCATCTTCTTCTTTTTCTGGTTGCTCAGTATTTGA

Library Parental gene expression (RPM)
SRP017611_brain 29 .36 RPM
SRP017611_kidney 41 .56 RPM
SRP017611_liver 19 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Otolemur garnettii ENSOGAG00000031466 ortholog_one2one 1 retrogene
retro_ogar_1951,
Oreochromis niloticus ENSONIG00000013523 ortholog_one2one 1 retrogene
retro_onil_48,
Ochotona princeps ENSOPRG00000004366 ortholog_one2one 2 retrogenes
retro_opri_166, retro_opri_667,
Pan troglodytes ENSPTRG00000018010 ortholog_one2one 1 retrogene
retro_ptro_2740,
Ictidomys tridecemlineatus ENSSTOG00000024478 ortholog_one2one 1 retrogene
retro_itri_480,
Tupaia belangeri ENSTBEG00000016320 ortholog_one2one 1 retrogene
retro_tbel_2183,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1241 81.52 50.56
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000016417 retrocopies