Parental gene:

CCNH, ENSPTRG00000017063

Aliases:None
Description:Pan troglodytes cyclin H (CCNH), mRNA. [Source:RefSeq mRNA;Acc:NM_001082413]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:28043330..28066792(+)


>ENSPTRG00000017063
ATGTACCACAACAGTAGTCAGAAGCGGCACTGGACTTTCTCCAGCGAGGAGCAGCTGGCAAGACTGCGGGCCGACGCCAA
CCGCAAATTCAGATGCAAAGCCGTGGCCAACGGGAAGGTTCTTCCGAATGATCCAGTCTTTCTTGAGCCTCATGAAGAAA
TGACACTCTGCAAATACTATGAGAAAAGGTTATTGGAATTCTGTTCGGTGTTTAAGCCAGCAATGCCAAGGTCTGTTGTG
GGTACGGCTTGTATGTATTTCAAACGTTTTTATCTTAATAACTCAGTAATGCAATATCACCCCAGGATAAAGAGGCTCAC
TTGTGCATTTTTGGCCTGCAAAGTAGATGAATTCAATGTATCTAGTCCTCAGTTTGTTGGAAACCTTCGGGAGAGTCCTC
TTGGACAGGAGAAGGCACTTGAACAGATACTGGAATATGAACTACTTCTTATACAGCAACTTAATTTCCACCTTATTGTC
CACAATCCTTACAGACCATTTGAGGGCTTCCTCATCGACTTAAAGACCCGCTATCCCATATTGGAGAATCCAGAGATTTT
GAGGAAAACAGCTGATGACTTTCTTAATAGAATTGCATTGACGGATGCTTACCTTTTATACACACCTTCCCAAATTGCCC
TGACTGCCATTTTATCTAGTGCCTCCAGGGCTGGAATTACTATGGAAAGTTATTTATCAGAGAGTCTGATGCTGAAAGAG
AACAGAACTTGCCTGTCACAGTTACTAGATATAATGAAAAGCATGAGAAACTTAGTAAAAAAGTATGAACCACCCAGATC
TGAAGAAGTTGCTGTTCTGAAACAGAAGTTGGAGCGATGTCATTCTGCTGAGCTTGCACTTAACGTAATCACGAAGAAGA
GGAAAGGCTATGAAGATGATGATTACGTCTCAAAGAAATCCAAACATGAGGAGGAAGAATGGACTGATGACGACCTGGTA
GAATCTCTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .41 RPM
SRP007412_cerebellum 24 .27 RPM
SRP007412_heart 12 .21 RPM
SRP007412_kidney 15 .51 RPM
SRP007412_liver 12 .28 RPM
SRP007412_testis 103 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000007765 ortholog_one2one 1 retrogene
retro_dnov_1618,
Homo sapiens ENSG00000134480 ortholog_one2one 1 retrogene
retro_hsap_3128,
Gorilla gorilla ENSGGOG00000005172 ortholog_one2one 1 retrogene
retro_ggor_2143,
Macaca mulatta ENSMMUG00000003248 ortholog_one2one 1 retrogene
retro_mmul_1991,
Mus musculus ENSMUSG00000021548 ortholog_one2one 1 retrogene
retro_mmus_2510,
Nomascus leucogenys ENSNLEG00000013604 ortholog_one2one 1 retrogene
retro_nleu_2248,
Oryctolagus cuniculus ENSOCUG00000004659 ortholog_one2one 1 retrogene
retro_ocun_588,
Pongo abelii ENSPPYG00000015619 ortholog_one2one 2 retrogenes
retro_pabe_2584, retro_pabe_2590,
Ictidomys tridecemlineatus ENSSTOG00000000659 ortholog_one2one 1 retrogene
retro_itri_856,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2116 77.23 62.23
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Download FASTA sequences of all ENSPTRG00000017063 retrocopies