Parental gene:

PLAC8, ENSPTRG00000016226

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:46894927..46921156(+)


>ENSPTRG00000016226
ATGCAAGCTCAGGCGCCGGTGGTCGTTGTGACCCAACCTGGAGTCGGTCCCGGTCCGGCCCCCCAGAACTCCAACTGGCA
GACAGGCATGTGTGACTGTTTCAGCGACTGCGGAGTCTGTCTCTGTGGCACATTTTGTTTCCCGTGCCTTGGGTGTCAAG
TTGCAGCTGATATGAATGAATGCTGTCTGTGTGGAACAAGCGTCGCAATGAGGACTCTCTACAGGACCCGATATGGCATC
CCTGGATCTATTTGTGATGACTATATGGCAACTCTTTGCTGTCCTCATTGTACTCTTTGCCAAATCAAGAGAGATATCAA
CAGAAGGAGAGCCATGCGTACTTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .09 RPM
SRP007412_cerebellum 2 .58 RPM
SRP007412_heart 1 .43 RPM
SRP007412_kidney 2 .80 RPM
SRP007412_liver 12 .18 RPM
SRP007412_testis 0 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000145287 ortholog_one2one 1 retrogene
retro_hsap_1165,
Gorilla gorilla ENSGGOG00000007464 ortholog_one2one 1 retrogene
retro_ggor_910,
Monodelphis domestica ENSMODG00000019309 possible_ortholog 1 retrogene
retro_mdom_950,
Mus musculus ENSMUSG00000029322 ortholog_one2one 1 retrogene
retro_mmus_1051,
Otolemur garnettii ENSOGAG00000017232 ortholog_one2one 1 retrogene
retro_ogar_714,
Rattus norvegicus ENSRNOG00000002217 ortholog_one2one 2 retrogenes
retro_rnor_1489, retro_rnor_1878,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_800 79.63 93.91
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000016226 retrocopies