Parental gene:

SHISA5, ENSPTRG00000014888

Aliases:None
Description:protein shisa-5 [Source:RefSeq peptide;Acc:NP_001233356]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:3:49215096..49249384(-)


>ENSPTRG00000014888
ATGACTGCGCCGGTCCCCGCGCCGCGGATCCTGTTGCCGTTGCTGTTGCTGCTGCTGCTAACGCCGCCTCCGGGTGCGCG
TGGTGAGGTGTGTATGGCTTCCCGTGGACTCAGCCTCTTCCCCGAGTCCTGTCCAGATTTCTGCTGTGGTACCTGTTATG
ACCAATACTGCTGCTCTGACGTGCTGAAGAAATTTGTGTGGAGCGAGGAAAGGTGTGCTGTGCCTGAGGCCAGCGTGCCT
GCCAGTGTAGAGCCGGTGGAGCAGCTGGGCTCGGCGCTGAGGTTTCGCCCTGGCTACAACGACCCCATGTCAGGGTTCGG
AGCGACCTTGGCCGTTGGCCTGACCATCTTTGTGCTGTCTGTCGTCACTATCATCATCTGCTTCACCTGCTCCTGCTGCT
GCCTTTACAAGACGTGCCGCCGACCACGTCCGGTTGTCACCACCACCACATCCACCACTGTGGTGCATGCCCCTTATCCT
CAGCCTCCAAGTGTGCCGCCCAGCTACCCTGGACCAAGCTACCAGGGCTACCACACCATGCCGCCTCAGCCAGGGATGCC
AGCAGCACCCTACCCAATGCAGTACCCACCACCTTACCCAGCCCAGCCCATGGGCCCACCGGCCTACCACGAGACCCTGG
CTGGAGGAGCAGCCGCACCCTACCCCGCCAGCCAGCCTCCTTACAACCCGGCCTACATGGATGCCCCGAAGGCGGCCCTC
TGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 142 .28 RPM
SRP007412_cerebellum 76 .21 RPM
SRP007412_heart 58 .93 RPM
SRP007412_kidney 152 .28 RPM
SRP007412_liver 281 .71 RPM
SRP007412_testis 22 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002915 ortholog_one2one 2 retrogenes
retro_cjac_4077, retro_cjac_4152,
Homo sapiens ENSG00000164054 ortholog_one2one 2 retrogenes
retro_hsap_4706, retro_hsap_4812,
Gorilla gorilla ENSGGOG00000028207 ortholog_one2one 2 retrogenes
retro_ggor_2996, retro_ggor_86,
Macaca mulatta ENSMMUG00000010062 ortholog_one2one 1 retrogene
retro_mmul_2565,
Nomascus leucogenys ENSNLEG00000006485 ortholog_one2one 1 retrogene
retro_nleu_1984,
Pongo abelii ENSPPYG00000013902 ortholog_one2one 3 retrogenes
retro_pabe_2120, retro_pabe_3653, retro_pabe_3739,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3128 83.08 54.17
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Download FASTA sequences of all ENSPTRG00000014888 retrocopies