Parental gene:

MTX2, ENSPTRG00000012674

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2B:180748797..180811517(+)


>ENSPTRG00000012674
ATGTCTCTAGTGGCGGAAGCCTTCGTCTCCCAGATTGCAGCTGCAGAACCTTGGCCTGAAAATGCTACATTATATCAGCA
ATTGAAAGGGGAGCAAATTTTACTTTCTGACAATGCAGCTTCTCTTGCAGTGCAGGCCTTTTTGCAAATGTGTAACTTGC
CTATCAAAGTAGTTTGTAGGGCAAATGCAGAATATATGTCTCCATCTGGTAAAGTCCCTTTTATTCATGTGGGAAATCAA
GTAGTATCAGAACTTGGTCCAATAGTCCAATTTGTTAAAGCCAAGGGCCATTCTCTTAGTGATGGGCTGGAGGAAGTCCA
AAAAGCAGAAATGAAAGCTTACATGGAATTAGTCAACAATATGCTGTTGACAGCAGAGCTGTATCTTCAGTGGTGTGATG
AAGCTACAGTAGGGGAGATCACTCATGCTAGGTATGGATCTCCTTACCCTTGGCCTCTGAATCATATTTTGGCCTATCAA
AAACAGTGGGAAGTCAAACGTAAGATGAAAGCTATTGGATGGGGAAAGAAGACTCTGGACCAGGTCTTAGAGGATGTAGA
CCAGTGCTGTCAAGCTCTCTCTCAAAGACTGGGAACACAACCGTATTTCTTCAATAAGCAGCCTACTGAACTTGACGCAC
TGGTATTTGGCCATCTATACACCATTCTTACCACACAATTGACAAATGATGAACTTTCTGAGAAGGTGAAAAACTATAGC
AACCTCCTTGCTTTCTGTAGGAGAATTGAACAGCACTATTTTGAAGATCGTGGTAAAGGCAGGCTGTCATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .63 RPM
SRP007412_cerebellum 13 .16 RPM
SRP007412_heart 18 .92 RPM
SRP007412_kidney 34 .39 RPM
SRP007412_liver 11 .72 RPM
SRP007412_testis 52 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009655 ortholog_one2one 1 retrogene
retro_chof_2429,
Cavia porcellus ENSCPOG00000011099 ortholog_one2one 1 retrogene
retro_cpor_218,
Dipodomys ordii ENSDORG00000003848 ortholog_one2one 2 retrogenes
retro_dord_159, retro_dord_192,
Homo sapiens ENSG00000128654 ortholog_one2one 1 retrogene
retro_hsap_3780,
Macaca mulatta ENSMMUG00000010185 ortholog_one2one 1 retrogene
retro_mmul_1643,
Nomascus leucogenys ENSNLEG00000006020 ortholog_one2one 1 retrogene
retro_nleu_1117,
Sarcophilus harrisii ENSSHAG00000016381 ortholog_one2one 1 retrogene
retro_shar_162,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2561 78.83 51.71
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Download FASTA sequences of all ENSPTRG00000012674 retrocopies