Parental gene:

RPRD1A, ENSPTRG00000009974

Aliases:None
Description:regulation of nuclear pre-mRNA domain-containing protein 1A [Source:RefSeq peptide;Acc:NP_001229515]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:18:31776858..31856627(-)


>ENSPTRG00000009974
ATGTCAGCCTTCTCTGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCTTGTC
CCTGTGGCTCATTCACCACCGTAAACACTCGCGGCCCATCGTCACCGTGTGGGAGCGGGAGCTGCGGAAAGCCAAACCAA
ACAGGAAGCTTACTTTTCTCTACCTAGCCAATGATGTCATACAGAACAGCAAGAGGAAGGGGCCAGAGTTTACAAAAGAT
TTTGCACCAGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGT
GTTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAACAACTTAAACAAGCTCTGTATGGTGATAAGA
AGCCTAGGAAGCGAACTTATGAACAGATAAAGGTGGATGAAAATGAAAACTGTTCCTCTCTGGGATCTCCAAGTGAACCA
CCACAGACTCTAGATCTCGTTAGAGCATTACAAGATCTAGAAAATGCAGCCTCAGGTGATGCAGCAGTTCATCAGAGGAT
AGCTTCTTTACCTGTTGAAGTCCAAGAAGTATCTCTGTTAGATAAAATAACAGATAAAGAATCTGGAGAAAGGCTTTCCA
AAATGGTAGAGGATGCGTGTATGTTGCTGGCAGATTACAATGGCAGATTGGCGGCAGAAATAGATGATAGAAAGCAACTC
ACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGAGTACAAGCG
CAAGCTAGCCAGAGTTTCCCTGGTGCGCAAAGAACTCAGGTCCCGGATCCAGAGCCTGCCAGACTTATCCCGATTGCCCA
ATGTCACTGGCAGCCACATGCACCTGCCCTTTGCGGGAGACATCTACAGTGAAGATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 41 .29 RPM
SRP007412_cerebellum 52 .55 RPM
SRP007412_heart 19 .73 RPM
SRP007412_kidney 22 .41 RPM
SRP007412_liver 10 .61 RPM
SRP007412_testis 38 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000007025 ortholog_one2one 1 retrogene
retro_eeur_245,
Gorilla gorilla ENSGGOG00000007369 ortholog_one2one 1 retrogene
retro_ggor_1237,
Macaca mulatta ENSMMUG00000018777 ortholog_one2one 1 retrogene
retro_mmul_1562,
Monodelphis domestica ENSMODG00000000399 ortholog_one2one 1 retrogene
retro_mdom_360,
Nomascus leucogenys ENSNLEG00000006228 ortholog_one2one 1 retrogene
retro_nleu_1323,
Pongo abelii ENSPPYG00000009111 ortholog_one2one 1 retrogene
retro_pabe_1352,
Vicugna pacos ENSVPAG00000001641 ortholog_one2one 1 retrogene
retro_vpac_62,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1106 74.47 59.29
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Download FASTA sequences of all ENSPTRG00000009974 retrocopies