Parental gene:

RPRD1A, ENSEEUG00000007025

Aliases:None
Description:regulation of nuclear pre-mRNA domain containing 1A [Source:HGNC Symbol;Acc:25560]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_4496:7838..102773(-)


>ENSEEUG00000007025
ATGTCCGCCTTCTCCGAGGCGGCGCTGGAGAAGAAGCTGTCGGAGTTGAGCAACTCGCAGCAGAGCGTGCAGACCCTGTC
CCTGTGGCTCATCCACCACCGCAAGCACTCGCGGCCCATCGTCACCGTGTGGGAGCGGGAGCTGCGCAAAGCCAAACCAA
ATAGGAAGCTTACTTTTCTCTACCTAGCCAATGATGTCATTCAGAACAGCAAACGGAAGGGCCCAGAGTTTACAAAAGAT
TTTGCACCAGTGATTGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGACGAGT
TTTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAGCAGCTTAAACAAGCTCTGTATGGTGATAAAA
AGCCTAGGAAACGAACTTATGACCAGATCAAAGTAGATGAAAATGAGAACTGCTCTTCCCTGGGATCACCAAGTGAACCG
CCACAGACTTTAGATCTTGTTAGAGCCTTACAAGATCTAGAAAATGCAGCATCAGGTGATGCAGCAGTTCATCAGAGGAT
CGCTTCTTTGCCAGTGGAAGTTCAAGAGGTATCCCTGCTGGACAAGATAACAGATAAGGAGTCTGGAGAAAGACTTTCTA
AGATGGTAGAGGATGCATGTATGTTGCTGGCAGATTATAATGGCAGATTGGCGGCAGAAATAGATGATAGGAAGCAGCTC
ACTCGAATGTTAGCAGATTTCCTTCGTTGTCAAAAGGAAGCCCTTGCCGAAAAAGAGCATAAATTGGAAGAATACAAGCG
CAAGTTAGCCAGAGTTTCCCTGGTGCGCAAAGAACTCAGGTCCAGGATCCAGAGCCTGCCGGACTTGTCTCGACTGCCCA
ATGTCACTGGCAGCCACATGCATCTGCCCTTTGCGGGAGACATCTACAGTGAAGACTGA

Library Parental gene expression (RPM)
SRP017611_brain 40 .93 RPM
SRP017611_kidney 23 .63 RPM
SRP017611_liver 13 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Gorilla gorilla ENSGGOG00000007369 ortholog_one2one 1 retrogene
retro_ggor_1237,
Macaca mulatta ENSMMUG00000018777 ortholog_one2one 1 retrogene
retro_mmul_1562,
Monodelphis domestica ENSMODG00000000399 ortholog_one2one 1 retrogene
retro_mdom_360,
Nomascus leucogenys ENSNLEG00000006228 ortholog_one2one 1 retrogene
retro_nleu_1323,
Pongo abelii ENSPPYG00000009111 ortholog_one2one 1 retrogene
retro_pabe_1352,
Pan troglodytes ENSPTRG00000009974 ortholog_one2one 1 retrogene
retro_ptro_1106,
Vicugna pacos ENSVPAG00000001641 ortholog_one2one 1 retrogene
retro_vpac_62,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_245 74.68 50.32
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSEEUG00000007025 retrocopies