Parental gene:

MAGOHB, ENSPTRG00000004679

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:10817431..10827257(-)


>ENSPTRG00000004679
ATGGCTATGGCTAGCGATTTCTACCTGCGCTACTACGTAGGGCACAAGGGCAAGTTTGGGCACGAGTTTCTGGAGTTCGA
ATTTCGGCCGGACGGAAAGCTTAGATATGCCAACAACAGCAATTACAAAAATGATGTCATGATCAGAAAAGAGGCTTATG
TGCACAAGAGTGTAATGGAAGAACTGAAGAGAATTATTGATGACAGTGAAATTACAAAAGAAGATGATGCTTTGTGGCCT
CCCCCTGATAGGGTTGGCCGACAGGAGCTTGAAATTGTAATTGGAGATGAGCACATATCTTTTACCACATCAAAAATAGG
TTCTCTTATTGATGTAAATCAGTCAAAGGATCCTGAAGGCCTTCGAGTATTTTACTATTTGGTACAAGATTTGAAATGTT
TAGTTTTCAGTCTTATTGGATTACACTTCAAGATTAAACCAATTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .07 RPM
SRP007412_cerebellum 4 .16 RPM
SRP007412_heart 3 .09 RPM
SRP007412_kidney 4 .29 RPM
SRP007412_liver 7 .01 RPM
SRP007412_testis 5 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004382 ortholog_one2one 1 retrogene
retro_chof_1730,
Callithrix jacchus ENSCJAG00000021662 ortholog_one2one 7 retrogenes
retro_cjac_1336, retro_cjac_1840, retro_cjac_1858, retro_cjac_2354, retro_cjac_3234, retro_cjac_3250, retro_cjac_546,
Dasypus novemcinctus ENSDNOG00000005997 ortholog_one2one 4 retrogenes
retro_dnov_140, retro_dnov_347, retro_dnov_423, retro_dnov_891,
Echinops telfairi ENSETEG00000016591 ortholog_one2one 3 retrogenes
retro_etel_1022, retro_etel_1566, retro_etel_2147,
Homo sapiens ENSG00000111196 ortholog_one2one 1 retrogene
retro_hsap_1360,
Macropus eugenii ENSMEUG00000001782 ortholog_one2one 1 retrogene
retro_meug_324,
Macaca mulatta ENSMMUG00000005082 ortholog_one2one 1 retrogene
retro_mmul_1246,
Monodelphis domestica ENSMODG00000000462 ortholog_one2one 1 retrogene
retro_mdom_424,
Nomascus leucogenys ENSNLEG00000003355 ortholog_one2one 1 retrogene
retro_nleu_1395,
Ochotona princeps ENSOPRG00000000548 ortholog_one2one 2 retrogenes
retro_opri_1171, retro_opri_308,
Pan troglodytes ENSPTRG00000000753 within_species_paralog 1 retrogene
retro_ptro_2156,
Ictidomys tridecemlineatus ENSSTOG00000000835 ortholog_one2one 1 retrogene
retro_itri_212,
Tupaia belangeri ENSTBEG00000014820 ortholog_one2one 7 retrogenes
retro_tbel_1250, retro_tbel_1393, retro_tbel_210, retro_tbel_2259, retro_tbel_2723, retro_tbel_2878, retro_tbel_451,
Tarsius syrichta ENSTSYG00000010452 ortholog_one2one 7 retrogenes
retro_tsyr_1730, retro_tsyr_1748, retro_tsyr_383, retro_tsyr_658, retro_tsyr_81, retro_tsyr_908, retro_tsyr_966,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_932 88.89 66.89
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2. retro_ptro_1179 89.93 99.32
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Download FASTA sequences of all ENSPTRG00000004679 retrocopies