Parental gene:

RAB1B, ENSPTRG00000003915

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:64228681..64237570(+)


>ENSPTRG00000003915
ATGAACCCCGAATATGACTACCTGTTTAAGCTGCTTTTGATTGGCGACTCAGGCGTGGGCAAGTCATGCCTGCTCCTGCG
GTTTGCTGATGACACGTACACAGAGAGCTACATCAGCACCATCGGGGTGGACTTCAAGATCCGAACCATCGAGCTGGATG
GCAAAACTATCAAACTTCAGATCTGGGACACAGCGGGCCAGGAACGGTTCCGGACCATCACTTCCAGCTACTACCGGGGG
GCTCATGGCATCATCGTGGTGTATGACGTCACTGACCAGGAATCCTACGCCAACGTGAAGCAGTGGCTGCAGGAGATTGA
CCGCTATGCCAGCGAGAACGTCAATAAGCTCCTGGTGGGCAACAAGAGCGACCTCACCACCAAGAAGGTGGTGGACAACA
CCACAGCCAAGGAGTTTGCAGACTCTCTGGGCATCCCCTTCTTGGAGACGAGCGCCAAGAATGCCACCAATGTCGAGCAG
GCGTTCATGACCATGGCTGCTGAAATCAAAAAGCGGATGGGGCCTGGAGCAGCCTCTGGGGGCGAGCGGCCCAATCTCAA
GATCGACAGCACCCCTGTAAAGCCAGCTGGCGGTGGCTGTTGCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 136 .24 RPM
SRP007412_cerebellum 104 .10 RPM
SRP007412_heart 59 .20 RPM
SRP007412_kidney 144 .04 RPM
SRP007412_liver 113 .39 RPM
SRP007412_testis 70 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001599 ortholog_one2one 1 retrogene
retro_cjac_931,
Homo sapiens ENSG00000174903 ortholog_one2one 1 retrogene
retro_hsap_4252,
Gorilla gorilla ENSGGOG00000009755 ortholog_one2one 2 retrogenes
retro_ggor_1792, retro_ggor_2850,
Macropus eugenii ENSMEUG00000000023 ortholog_one2one 1 retrogene
retro_meug_1985,
Monodelphis domestica ENSMODG00000008371 ortholog_one2one 1 retrogene
retro_mdom_196,
Pongo abelii ENSPPYG00000003031 ortholog_one2one 1 retrogene
retro_pabe_3386,
Pan troglodytes ENSPTRG00000001370 other_paralog 1 retrogene
retro_ptro_681,
Pan troglodytes ENSPTRG00000011989 within_species_paralog 1 retrogene
retro_ptro_1727,
Sarcophilus harrisii ENSSHAG00000010376 ortholog_one2one 1 retrogene
retro_shar_68,
Ictidomys tridecemlineatus ENSSTOG00000011052 ortholog_one2one 1 retrogene
retro_itri_1677,
Drosophila melanogaster FBgn0016700 ortholog_one2many 1 retrogene
retro_dmel_36,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2892 92.08 100.00
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Download FASTA sequences of all ENSPTRG00000003915 retrocopies