Parental gene:

PPIF, ENSPTRG00000002669

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:H2Q253]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:10:77979433..77987291(+)


>ENSPTRG00000002669
ATGCTGGCGCTGCGCTGCGGCTCCCGCTGGCTCGGCCTGCTCTCCGTCCCGCGCTCCGTGCCGCTGCGCCTCCCCGCGGC
CCGCGCCTGCAGCAAGGGCGCCGGCGACCCGTCCTCTTCCTCCTCCTCCGGGAACCCGCTCGTGTACCTGGACGTGGACG
CCAACGGGAAGCCGCTCGGCCGCGTGGTGCTGGAGTTGAAGGCAGATGTCGTCCCAAAGACAGCTGAGAACTTCAGAGCC
CTGTGCACTGGTGAGAAGGGCTTCGGCTACAAAGGCTCCACCTTCCACAGGGTGATCCCTTCCTTCATGTGCCAGGCGGG
CGACTTCACCAACCACAACGGCACAGGCGGGAAGTCCATCTACGGAAGCCGCTTTCCTGACGAGAACTTTACACTGAAGC
ACGTGGGGCCAGGTGTCCTGTCCATGGCTAATGCTGGTCCTAACACCAACGGCTCCCAGTTCTTCATCTGCACCATAAAG
ACAGACTGGTTGGATGGCAAGCATGTTGTGTTCGGTCACGTCAAAGAGGGCATGGACGTCGTGAAGAAAATAGAATCTTT
CGGCTCTAAGAGTGGGAGGACATCCAAGAAGATTGTCATCACAGACTGTGGCCAGTTGAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 59 .99 RPM
SRP007412_cerebellum 33 .45 RPM
SRP007412_heart 73 .27 RPM
SRP007412_kidney 82 .20 RPM
SRP007412_liver 125 .67 RPM
SRP007412_testis 21 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000008796 ortholog_one2one 3 retrogenes
retro_ecab_507, retro_ecab_649, retro_ecab_732,
Homo sapiens ENSG00000108179 ortholog_one2one 1 retrogene
retro_hsap_1436,
Microcebus murinus ENSMICG00000007086 ortholog_one2one 8 retrogenes
retro_mmur_1266, retro_mmur_218, retro_mmur_515, retro_mmur_568, retro_mmur_605, retro_mmur_694, retro_mmur_769, retro_mmur_87,
Nomascus leucogenys ENSNLEG00000010567 ortholog_one2one 1 retrogene
retro_nleu_70,
Procavia capensis ENSPCAG00000009406 ortholog_one2one 1 retrogene
retro_pcap_275,
Pan troglodytes ENSPTRG00000023064 other_paralog 77 retrogenes
retro_ptro_1116, retro_ptro_1122, retro_ptro_1124, retro_ptro_1213, retro_ptro_1277, retro_ptro_1328, retro_ptro_1377, retro_ptro_1399, retro_ptro_1401, retro_ptro_1423, retro_ptro_1449, retro_ptro_1463, retro_ptro_1529, retro_ptro_1531, retro_ptro_1544, retro_ptro_1596, retro_ptro_1626, retro_ptro_1639, retro_ptro_1672, retro_ptro_1717, retro_ptro_1779, retro_ptro_1787, retro_ptro_1835, retro_ptro_1843, retro_ptro_1889, retro_ptro_1890, retro_ptro_1891, retro_ptro_1916, retro_ptro_1925, retro_ptro_195, retro_ptro_1952, retro_ptro_2012, retro_ptro_2014, retro_ptro_210, retro_ptro_2136, retro_ptro_2138, retro_ptro_2161, retro_ptro_2260, retro_ptro_2272, retro_ptro_2425, retro_ptro_2546, retro_ptro_2562, retro_ptro_2611, retro_ptro_2642, retro_ptro_2663, retro_ptro_2689, retro_ptro_2692, retro_ptro_278, retro_ptro_2806, retro_ptro_2899, retro_ptro_2904, retro_ptro_2914, retro_ptro_293, retro_ptro_2945, retro_ptro_2967, retro_ptro_3010, retro_ptro_3033, retro_ptro_3049, retro_ptro_326, retro_ptro_394, retro_ptro_458, retro_ptro_472, retro_ptro_477, retro_ptro_498, retro_ptro_518, retro_ptro_521, retro_ptro_527, retro_ptro_541, retro_ptro_567, retro_ptro_585, retro_ptro_783, retro_ptro_825, retro_ptro_853, retro_ptro_879, retro_ptro_889, retro_ptro_905, retro_ptro_921,
Pteropus vampyrus ENSPVAG00000001713 ortholog_one2one 2 retrogenes
retro_pvam_380, retro_pvam_623,
Tupaia belangeri ENSTBEG00000015457 ortholog_one2one 1 retrogene
retro_tbel_1906,
Xenopus tropicalis ENSXETG00000018981 possible_ortholog 1 retrogene
retro_xtro_20,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_979 67.27 78.26
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Download FASTA sequences of all ENSPTRG00000002669 retrocopies