Parental gene:

RCC2, ENSPPYG00000025834

Aliases:None
Description:regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:30297]
Organism:Orangutan (Pongo abelii)
Coordinates:1:212988409..213019421(+)


>ENSPPYG00000025834
ATGCCCAGGAAGAAGGCGGCGGCGGCGGCCTGGGAGGAGCCGAGCTCGGGCAACGGCACTGCCCGCGCCGGGCCCAGGAA
ACGCGGCGGCCCGGCGGGCAGGAAGCGCGAGCGGCCCGAGCGCTGCAGTAGCAGCAGCGGCGGCGGCAGCAGCGGCGACG
AGGACGGCCTTGAGCTCGACGGGGCCCCCGGCGGGGGCAAGCGCGCGGCGCGGCCGGCGACAGCAGGCAAGGCGGGCGGN
NNNNNNNNNNNNNNNNNNNNNNNNNGCGGCAGAAGTGATGTGAGGCGCNNNNNNNNNNCAAAGTGCAAAGGGCAGCTTTT
GATTTTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGTGCCTAAACAGCAAGCTGCTTACCGCAATCTCGGTC
AGAATTTGTGGGGGCCCCACAGATATGGGTGCCTGGCGGGGGTCCGGGTGCGGACAGTGGTCTCAGGCTCCTGTGCTGCA
CACAGCCTCCTCATCACCACGGAAGGGAAGCTGTGGAGCTGGGGTCGAAATGAGAAGGGGCAGCTGGGACATGGTGACAC
CAAGAGAGTAGAAGCCCCTAGACTCATCGAGGGTCTCAGCCACGAAGTGATTGTGTCTGCAGCATGTGGGCGGAACCACA
CCTTGGCCTTGACGGAAACGGGCTCCGTGTTTGCGTTTGGGGAAAACAAGATGGGGCAGCTGGGCCTTGGCAACCAGACA
GACGCTGTCCCCAGCCCCGCGCAGATAATGTACAACGGCCAGCCAATTACCAAAATGGCCTGTGGGGCTGAATTCAGTAT
GATAATGGACTGCAAAGGAAACCTCTATTCCTTTGGGTGCCCTGAATATGGTCAGCTGGGACACAACTCAGATGGGAAGT
TCATCGCCCGGGCACAGCGGATAGAGTACGACTGCGAACTAGTTCCCCGGCGAGTGGCCATCTTCATTGAGAAGACGAAA
GACGGACAGATTCTGCCTGTACCAAACGTGGTTGTACGAGACGTGGCCTGTGGCGCTAATCACACGCTGGTCCTGGACTC
CCAGAAGCGAGTCTTCTCCTGGGGCTTCGGTGGCTATGGCCGGCTGGGCCACGCAGAGCAGAAGGATGAGATGGTCCCCC
GCCTGGTGAAGCTGTTTGACTTCCCTGGGCGTGGGGCTTCCCAGATCTATGCTGGTTACACCTGCTCCTTTGCCGTCAGC
GAAGTGGGTGGTCTGTTTTTCTGGGGGGCCACCAACACCTCTCGTGAATCTACCATGTACCCAAAAGCAGTGCAGGACCT
CTGCGGCTGGAGAATCCGGAGCCTGGCTTGTGGGAAGAGCAGCATCATTGTGGCCGCCGACGAGAGCACCATCAGCTGGG
GCCCATCACCGACCTTTGGGGAACTGGGCTACGGGGACCACAAGCCCAAGTCTTCCACTGCAGCCCAGGAGGTGAAGACT
CTGGATGGCATTTTCTCAGAGCAGGTCGCCATGGGCTACTCACACTCCTTGGTGATAGCAAGAGACGAAAGTGAGACTGA
GAAAGAGAAGATCAAGAAACTGCCAGAATACAACCCCCGAACCCTC

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .01 RPM
SRP007412_cerebellum 27 .97 RPM
SRP007412_heart 8 .79 RPM
SRP007412_kidney 40 .17 RPM
SRP007412_liver 14 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001396 ortholog_one2one 1 retrogene
retro_dnov_2692,
Homo sapiens ENSG00000179051 ortholog_one2one 3 retrogenes
retro_hsap_2677, retro_hsap_3073, retro_hsap_3597,
Gorilla gorilla ENSGGOG00000015263 ortholog_one2one 1 retrogene
retro_ggor_2112,
Nomascus leucogenys ENSNLEG00000007783 ortholog_one2one 2 retrogenes
retro_nleu_2483, retro_nleu_298,
Otolemur garnettii ENSOGAG00000014544 ortholog_one2one 1 retrogene
retro_ogar_2967,
Pan troglodytes ENSPTRG00000000247 ortholog_one2one 3 retrogenes
retro_ptro_1804, retro_ptro_2072, retro_ptro_2434,
Rattus norvegicus ENSRNOG00000006327 ortholog_one2one 1 retrogene
retro_rnor_1378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_748 87.13 76.82
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2. retro_pabe_2547 81.61 66.09
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3. retro_pabe_2957 71.48 51.53
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Download FASTA sequences of all ENSPPYG00000025834 retrocopies