Parental gene:

RCC2, ENSDNOG00000001396

Aliases:None
Description:regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:30297]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_6973:5589..38722(-)


>ENSDNOG00000001396
AAACTTGAAGGGTCTAAGTGCAAAGGGCAGCTTTTGATATTTGGGGCAACCAACTGGGACTTGATTGGTCGAAAAGAAGT
GCCTAAACAACAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGT
CGAAATGAGAAGGGACAGCTGGGACATGGTGACACCAAGAGAGTTGAGGCTCCCAGGCTCATCGAGGGTCTCAGCCACGA
GGCGATTGTGTCCGCGGCGTGTGGGCGGAACCACACCCTGGCCCTGACAGAAACGGGCTCCGTGTTTGCATTTGGCGAGA
ACAAGATGGGGCAACTGGGCCTTGGCAACCAGACCGACGCGGTGCCCAGCCCGGCCCAGATAATGTACAACGGCCAGCCA
ATTACGAAAATGGCCTGTGGGGCTGAATTCAGTATGATAATGGACTGTAAAGGAAACCTCTATTCCTTTGGGTGCCCTGA
ATATGGTCAGCTGGGACACAACTCTGATGGGAAGTTCATCGCACGAGCACAGCGGATAGAGTATGACTGCGAGCTGGTTC
TCCGGAGAGTGGCCATCTTCATCGAGACGAAAGACGGGCAGATTTTGCCAGTACCAAATGTGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCTGGTCCTGGACTCCCAGAAGCGCGTCTTCTCCTGGGGGTTCGGTGGCTATGGGCGGCTGGG
CCACGCGGAGCAGAAGGACGAGATGGTGCCCCGCCTGGTGAAGCTGTTTGACTTCCCTGGTCGTGGGGCATCCCAGATCT
ATGCCGGCTACACCTGCTCCTTTGCCGTCAGTGAAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGAGCAGTATCAT
CGTGGCTGCAGATGAGAGCACGATCAGCTGGGGCCCGTCTCCGACCTTCGGGGAGCTGGGCTACGGGGATCACAAACCCA
AGTCTTCCACTGCAGCCCAAGAGGTCAAGACGCTGGACGGCATTTTCACAGAGCAGGTTGCCATGGGCTACTCGCACTCC
TTGGTAATCGCAAGAGACGAAAGTGAAACCGAGAAGGAGAAGATCAAGAAACTGCCAGAGTATAACCCCCGAACCCTCTG
A

Library Parental gene expression (RPM)
SRP012922_ascending_colon 17 .50 RPM
SRP012922_cerebellum 9 .07 RPM
SRP012922_heart 4 .64 RPM
SRP012922_kidney 7 .39 RPM
SRP012922_liver 4 .95 RPM
SRP012922_lung 14 .97 RPM
SRP012922_quadricep_muscle 3 .29 RPM
SRP012922_spleen 27 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000179051 ortholog_one2one 3 retrogenes
retro_hsap_2677, retro_hsap_3073, retro_hsap_3597,
Gorilla gorilla ENSGGOG00000015263 ortholog_one2many 1 retrogene
retro_ggor_2112,
Nomascus leucogenys ENSNLEG00000007783 ortholog_one2one 2 retrogenes
retro_nleu_2483, retro_nleu_298,
Otolemur garnettii ENSOGAG00000014544 ortholog_one2one 1 retrogene
retro_ogar_2967,
Pongo abelii ENSPPYG00000025834 ortholog_one2one 3 retrogenes
retro_pabe_2547, retro_pabe_2957, retro_pabe_748,
Pan troglodytes ENSPTRG00000000247 ortholog_one2one 3 retrogenes
retro_ptro_1804, retro_ptro_2072, retro_ptro_2434,
Rattus norvegicus ENSRNOG00000006327 ortholog_one2one 1 retrogene
retro_rnor_1378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2692 91.63 53.05
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Download FASTA sequences of all ENSDNOG00000001396 retrocopies