Parental gene:

LAGE3, ENSPPYG00000020881

Aliases:None
Description:L antigen family, member 3 [Source:HGNC Symbol;Acc:26058]
Organism:Orangutan (Pongo abelii)
Coordinates:X:154597549..154600468(-)


>ENSPPYG00000020881
ATGCGGGAGGCGGATGCACACGCAGGCGGAGGCGCCGACGGCGGGGATGGCCAGGGTGGTCACAGCTGCCGCGGGGTCGT
GGACACAGCTGCAGCTCCGGCCGGTGGCGCTCCCCCAGCGCACGCGCCAGGTTCCAGCAGAGACGCCGCGTCTGCGGCCA
GGGGGTCAGGAATGCGGCCGCACATATTCACCCTCAGCGTGCCTTTCCCGACCCCCTTGGAGGCGGAAATCGCCCATGGG
TCCCTGGCACCAGATGCCGAGCCCCACCAAAGGGTGATTGGGAAGGATCTCACAGTGAGCGGCAGGATCCTGGTAGTCCG
CTGGAAAGCTGAAGACTGTCGCCTGCTCCGAATTTCCGTCATCAACTTTCTTGACCAACTTTCCCTGGTGGTGCGGACCA
TGCAGCGCTTTGGGCCCCCCGTTTCCCGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .14 RPM
SRP007412_cerebellum 10 .94 RPM
SRP007412_heart 1 .81 RPM
SRP007412_kidney 10 .74 RPM
SRP007412_liver 7 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000024143 possible_ortholog 1 retrogene
retro_dnov_244,
Dipodomys ordii ENSDORG00000009093 ortholog_one2one 1 retrogene
retro_dord_448,
Homo sapiens ENSG00000196976 ortholog_one2one 1 retrogene
retro_hsap_4244,
Gorilla gorilla ENSGGOG00000013507 ortholog_one2one 1 retrogene
retro_ggor_2845,
Macaca mulatta ENSMMUG00000007739 ortholog_one2one 1 retrogene
retro_mmul_1145,
Mus musculus ENSMUSG00000015289 ortholog_one2one 2 retrogenes
retro_mmus_1411, retro_mmus_1665,
Nomascus leucogenys ENSNLEG00000014285 ortholog_one2one 1 retrogene
retro_nleu_1373,
Ochotona princeps ENSOPRG00000003778 ortholog_one2one 2 retrogenes
retro_opri_196, retro_opri_549,
Rattus norvegicus ENSRNOG00000037249 ortholog_one2one 1 retrogene
retro_rnor_595,
Sus scrofa ENSSSCG00000025528 ortholog_one2many 1 retrogene
retro_sscr_94,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3394 82.64 100.00
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Download FASTA sequences of all ENSPPYG00000020881 retrocopies