Parental gene:

COPS5, ENSPPYG00000018648

Aliases:None
Description:COP9 signalosome subunit 5 [Source:HGNC Symbol;Acc:2240]
Organism:Orangutan (Pongo abelii)
Coordinates:8:69244419..69265627(-)


>ENSPPYG00000018648
ATGGCGGCGTCCGGGAGCGGTATGGCCCAGAAAACCTGGGAACTGGCCAACAACATGCAGGAAGCTCAGAGTATCGATGA
AATCTACAAATACGACAAGAAACAGCAGCAAGAAATCCTGGCGGCGAAGCCCTGGACTAAGGATCACCATTACTTTAAGT
ACTGCAAAATCTCAGCATTGGCTCTGCTGAAGATGGTGATGCATGCCAGATCAGGAGGCAACTTGGAAGTGATGGGTCTG
ATGCTAGGAAAGGTGGATGGTGAAACCATGATCATTATGGACAGTTTTGCTTTGCCTGTGGAGGGTACTGAAACCCGAGT
AAATGCTCAGGCTGCTGCATATGAATACATGGCTGCATACATAGAAAATGCCAAACAGGTTGGCCGCCTTGAAAATGCAA
TCGGGTGGTATCATAGCCACCCTGGCTATGGCTGCTGGCTTTCTGGGATTGATGTTAGTACTCAGATGCTCAATCAGCAG
TTCCAGGAACCATTTGTAGCAGTGGTGATTGATCCAACAAGAACAATATCCGCAGGGAAAGTGAATCTTGGCGCCTTTAG
GACATACCCAAAGGGCTACAAACCTCCTGATGAAGGACCTTCTGAGTACCAGACTATCCCACTTAATAAAATAGAAGATT
TTGGTGTACACTGCAAACAATATTATGCCTTAGAAGTCTCATATTTCAAATCCTCTTTGGATCGCAAATTGCTCGAGCTA
TTGTGGAATAAATACTGGGTGAATACGTTGAGTTCCTCTAGCTTGCTTACTAATGCAGACTATACCACTGGTCAGGTCTT
TGATTTGTCTGAAAAGTTAGAGCAGTCAGAAGCCCAGCTGGGACGAGGGAGTTTCATGTTGGGTTTAGAAACGCATGACC
GAAAATCAGAAGACAAACTTGCCAAAGCTACGAGAGACAGCTGTAAAACTACCATAGAAGCTATCCATGGATTGATGTCT
CAGGTTATTAAGGATAAACTGTTTAATCAAATTAACATCTCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 32 .57 RPM
SRP007412_cerebellum 38 .06 RPM
SRP007412_heart 32 .99 RPM
SRP007412_kidney 26 .32 RPM
SRP007412_liver 29 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004632 ortholog_one2many 1 retrogene
retro_cjac_2454,
Homo sapiens ENSG00000121022 ortholog_one2one 1 retrogene
retro_hsap_3634,
Microcebus murinus ENSMICG00000011042 ortholog_one2one 1 retrogene
retro_mmur_834,
Monodelphis domestica ENSMODG00000007838 ortholog_one2one 1 retrogene
retro_mdom_1460,
Mustela putorius furo ENSMPUG00000010175 possible_ortholog 1 retrogene
retro_mputfur_397,
Nomascus leucogenys ENSNLEG00000010914 ortholog_one2one 1 retrogene
retro_nleu_815,
Pan troglodytes ENSPTRG00000020317 ortholog_one2one 2 retrogenes
retro_ptro_2457, retro_ptro_638,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2980 79.45 75.15
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Download FASTA sequences of all ENSPPYG00000018648 retrocopies