Parental gene:

CCDC25, ENSPPYG00000018468

Aliases:None
Description:Coiled-coil domain-containing protein 25 [Source:UniProtKB/Swiss-Prot;Acc:Q5R9S1]
Organism:Orangutan (Pongo abelii)
Coordinates:8:27568788..27607501(-)


>ENSPPYG00000018468
ATGGTGTTCTACTTCACCAGCAGCAGCGTTAATTCATCTGCCTACACTATTTACATGGGAAAAGACAAATATGAAAATGA
AGATCTGATCAAGCATGGCTGGCCTGAAGATATCTGGTTTCATGTGGACAAACTCTCTTCGGCTCATGTATACCTTCGAT
TACATAAGGGAGAGAATATAGAAGACATCCCAAAGGAAGTGCTGATGGACTGTGCCCACCTTGTGAAGGCCAATAGCATT
CAAGGCTGCAAGATGAACAACGTTAATGTGGTATATACGCCGTGGTCTAACCTGAAGAAAACAGCTGACATGGATGTGGG
GCAGATAGGCTTTCACAGGCAGAAGGATGTAAAAATTGTGACAGTGGAGAAGAAAGTAAATGAGATCCTGAACCGATTAG
AAAAGACCAAAGTCGAGCGGTTCCCAGACCTAGCAGCAGAGAAAGAATGCAGAGATCGTGAAGAGAGGAATGAGAAAAAA
GCCCAAATTCAGGAAATGAAAAGGAGAGAAAAAGAAGAAATGAAGAAGAAGAGGGAAATGGATGAACTTAGGAGCTATTC
ATCACTAATGAAAGTTGAAAATATGTCTTCAAATCAGGATGGCAATGATTCAGATGAATTCATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 24 .16 RPM
SRP007412_cerebellum 14 .35 RPM
SRP007412_heart 7 .59 RPM
SRP007412_kidney 15 .58 RPM
SRP007412_liver 9 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012971 ortholog_one2one 2 retrogenes
retro_chof_2254, retro_chof_847,
Dipodomys ordii ENSDORG00000006595 ortholog_one2one 1 retrogene
retro_dord_491,
Echinops telfairi ENSETEG00000006478 ortholog_one2one 1 retrogene
retro_etel_434,
Homo sapiens ENSG00000147419 ortholog_one2one 1 retrogene
retro_hsap_1701,
Gorilla gorilla ENSGGOG00000009685 ortholog_one2one 1 retrogene
retro_ggor_1274,
Monodelphis domestica ENSMODG00000015976 ortholog_one2one 1 retrogene
retro_mdom_511,
Pan troglodytes ENSPTRG00000020109 ortholog_one2one 1 retrogene
retro_ptro_141,
Sarcophilus harrisii ENSSHAG00000018434 possible_ortholog 1 retrogene
retro_shar_723,
Tarsius syrichta ENSTSYG00000000732 ortholog_one2one 1 retrogene
retro_tsyr_1364,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_477 89.62 50.48
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2. retro_pabe_1364 85.96 54.81
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Download FASTA sequences of all ENSPPYG00000018468 retrocopies