Parental gene:

ENSPPYG00000017277

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:6_random:12244256..12278939(-)


>ENSPPYG00000017277
ATGCGCCCTGCAGCCCTGCGTGGGGCCCTGCTGGGCTGCCTCTACCTGGCGTTGCTTTGCCTGGGCGGTGCAGACAAGCG
CCTGCGTGACAACCATGAGTGGAAAAAACTAATTATGGTTCAGCACTGGCCTGAGACAGTATGCGAGAAAATTCAAAACG
ACTGTAGAGACCCTCCGGATTACTGGACAATACATGGACTATGGCCCGATAAAAGTGAAGGATGTAATAGATCTTGGCCC
TTCAATTTAGAAGAGATTAAGGATCTTTTGCCAGAAATGAAGGCATCCTCGCCTGACGTAATTCACTCATTTCCCAATCG
CAGCCGCTTCTGGAAGCATGAGTGGGAAAAGCATGGGACCTGTGCCGCCCAGGTGGACGCGCTCAGCTCCCAGAAGAAGT
ACTTCGGCAGAAGCCTGGAACTCTACAGGGAGCTGGACCTCAACAGTGTGCTCCTAAAATTGGGGATAAAACCATCCATC
AATTACTACCAAGTTGCAGATTTTAAAGATGCCCTCGCCAGAGTATATGGAGTGATACCCAAAATCCAGTGCCTTCCACC
AAGCCAGGATGAGGAAGTACAGACAATTGGTCAGATAGAACTGTGCCTCACTAAGCAAGACCAGCAGCTGCAAAACTGCA
CCGAGCCAGGGGAGCAGCCGTCCCCCAAGCAGGAAGTCTGGCTGGCAAATGGGGCCGCCGAGAGCCGGGGTCTGAGGGTC
TGTGAAGATGGCCCAGTCTTCTATCCCCCACCTAAAAAGACCAAGCATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .38 RPM
SRP007412_cerebellum 3 .28 RPM
SRP007412_heart 3 .01 RPM
SRP007412_kidney 9 .35 RPM
SRP007412_liver 17 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000003359 ortholog_one2one 1 retrogene
retro_lafr_764,
Microcebus murinus ENSMICG00000014184 ortholog_one2one 1 retrogene
retro_mmur_1544,
Macaca mulatta ENSMMUG00000005673 ortholog_one2one 1 retrogene
retro_mmul_1684,
Monodelphis domestica ENSMODG00000006193 ortholog_one2one 1 retrogene
retro_mdom_1994,
Nomascus leucogenys ENSNLEG00000011573 ortholog_one2one 1 retrogene
retro_nleu_3005,
Pan troglodytes ENSPTRG00000018796 ortholog_one2one 1 retrogene
retro_ptro_2529,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3128 84.27 69.14
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Download FASTA sequences of all ENSPPYG00000017277 retrocopies