Parental gene:

IMPDH2, ENSPPYG00000013884

Aliases:None
Description:IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:HGNC Symbol;Acc:6053]
Organism:Orangutan (Pongo abelii)
Coordinates:3:97464428..97469398(+)


>ENSPPYG00000013884
ATGGCCGACTACCTGATTAGTGGGGGCACGTCCTACGTGCCAGACGACGGACTCACAGCACAGCAGCTCTTCAACTGCGG
AGATGGCCTCACCTACAATGACTTTCTCATTCTCCCTGGGTACATCGACTTCACTGCAGACCAGGTGGACCTGACTTCTG
CTCTGACCAAGAAAATCACTCTTAAGACCCCACTGGTTTCCTCTCCCATGGACACAGTCACAGAGGCTGGGATGGCCATA
GCAATGGCGCTTACAGGCGGTATTGGCTTCATCCACCACAACTGTACACCTGAATTCCAGGCCAATGAAGTTCGGAAAGT
GAAGAAATACGAACAGGGATTCATCACAGACCCTGTGGTCCTCAGCCCCAAGGATCGCGTGCGGGATGTTTTTGAGGCCA
AGGCCCGGCATGGTTTCTGCGGTATCCCAATCACAGACACAGGCCGGATGGGGAGCCGCTTGGTGGGCATCATCTCCTCC
AGGGACATTGATTTTCTCAAAGAGGAGGAACATGACTGTTTCTTGGAAGAGATAATGACAAAGAGGGAAGACTTGGTGGT
AGCCCCTGCAGGCATCACACTGAAGGAGGCAAATGAAATTCTGCAGCGCAGCAAGAAGGGAAAGTTGCCCATTGTAAATG
AAGATGATGAGCTTGTGGCCATCATTGCCCGGACAGACCTGAAGAAGAATCGGGACTACCCACTAGCCTCCAAAGATGCC
AAGAAACAGCTGCTGTGTGGGGCAGCCATTGGCACTCATGAGGATGACAAGTATAGGCTGGACTTGCTCGCCCAGGCTGG
TGTGGATGTAGTGGTTTTGGACTCTTCCCAGGGAAATTCCATCTTCCAGATCAATATGATCAAGTACATCAAAGAGAAAT
ACCCTAATCTCCAAGTCATTGGAGGCAATGTGGTCACTGCTGCCCAGGCCAAGAACCTCATTGATGCAGGTGTGGATGCC
CTGCGGGTGGGCATGGGAAGTGGCTCCATCTGCATTACACAGGAAGTGCTGGCCTGTGGGCGGCCCCAAGCAACAGCAGT
GTACAAGGTGTCAGAGTATGCACGGCGCTTTGGTGTTCCGGTCATTGCTGATGGAGGAATCCAAAATGTGGGTCATATTG
CAAAAGCCTTGGCCCTTGGGGCCTCCACAGTCATGATGGGCTCTCTTCTGGCTGCCACCACTGAGGCCCCTGGTGAATAC
TTCTTTTCCGATGGGATCCGGCTAAAGAAATATCGCGGTATGGGTTCTCTCGATGCCATGGACAAGCACCTCAGCAGCCA
GAACAGATATTTCAGTGAAGCTGACAAAATCAAAGTGGCCCAGGGGGTGTCTGGTGCTGTGCAGGACAAAGGGTCCATCC
ACAAATTTGTCCCTTACCTGATTGCTGGCATCCAACACTCATGCCAGGACATTGGTGCCAAGAGCTTGACCCAAGTCCGA
GCCATGATGTACTCTGGGGAGCTTAAATTTGAGAAGAGAACGTCCTCAGCCCAGGTGGAAGGTGGCGTCCATAGCCTCCA
TTCGTATGAGAAGCGGCTTTTCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 32 .01 RPM
SRP007412_cerebellum 43 .41 RPM
SRP007412_heart 18 .51 RPM
SRP007412_kidney 32 .19 RPM
SRP007412_liver 25 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000009844 ortholog_one2one 1 retrogene
retro_fcat_1377,
Homo sapiens ENSG00000178035 ortholog_one2one 1 retrogene
retro_hsap_697,
Gorilla gorilla ENSGGOG00000013245 ortholog_one2one 1 retrogene
retro_ggor_594,
Mus musculus ENSMUSG00000062867 ortholog_one2one 1 retrogene
retro_mmus_3158,
Nomascus leucogenys ENSNLEG00000006743 ortholog_one2one 7 retrogenes
retro_nleu_1126, retro_nleu_1371, retro_nleu_1378, retro_nleu_1591, retro_nleu_2183, retro_nleu_2188, retro_nleu_359,
Pongo abelii ENSPPYG00000017976 within_species_paralog 7 retrogenes
retro_pabe_2133, retro_pabe_2138, retro_pabe_2346, retro_pabe_3102, retro_pabe_3292, retro_pabe_3392, retro_pabe_3736,
Pan troglodytes ENSPTRG00000014908 ortholog_one2one 1 retrogene
retro_ptro_501,
Rattus norvegicus ENSRNOG00000031965 ortholog_one2one 1 retrogene
retro_rnor_1523,
Tursiops truncatus ENSTTRG00000017349 ortholog_one2one 2 retrogenes
retro_ttru_1148, retro_ttru_1665,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_528 73.84 87.16
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Download FASTA sequences of all ENSPPYG00000013884 retrocopies