Parental gene: | IQCB1, ENSPPYG00000013494 |
| Aliases: | None |
| Description: | IQ motif containing B1 [Source:HGNC Symbol;Acc:28949] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:10887071..10967034(+) |
>ENSPPYG00000013494
ATGAAGCCAACAGGTACAGACCCAAGGATCTTATCTATAGCTGCTGAAGTTGCAAAAAGCCCTGAGCAGAATGTCCCTGT
TATACTGTTGAAGTTAAAAGAAATAATAAACATCACACCTTTAGGAAGCTCAGAGTTGAAGAAAATCAAACAAGATATAT
ATTGTTATGATCTCATTCAATATTGCCTCTTGGTCCTCAGTCAAGATTGTTCTCGAATCCAGGGTGGTTGGACTACAATT
TCCCAGCTTACACAGATATTAAGCCATTGCTGTGTGGGCTTGGAGCCAGGAGAAGATGCAGAGGAATTTTACAATGAATT
ACTTCCATCAGCTGCAGAAAATTTTCTAGTTTTGGGGAGACAATTACAAACATGTTTTATCAATGCAGCTAAGGCTGAAG
AAAAAGATGAATTACTACACTTTTTCCAAATTGTGACTGATTCTCTCTTCTGGCTTTTGGGAGGCCATGTTGAACTTATT
CAGAATGTACTACAAAGTGATCATTTCTTACATTTACTGCAAGCTGACAATGTCCAAATAGGATCTGCAGTCATGATGAT
GCTACAGAATATACTACAGATCAACAGTGGTGATTTACTCAGAATAGGAAGAAAAGCCCTGTATTCAATTTTAGATGAAG
TTATTTTCAAGCTTTTTTCAACTCCTAGTCCAGTCATAAGAAGTACTGCTACAAAACTCCTACTGTTGATGGCTGAATCC
CATCAGGAAATTTTGATTTTACTAAGACAAAGTACCTGCTACAAAGGACTCAGAAGTCTACTAAGTAAACAGGAAACTGG
GACCGAATTCAGTCAAGAACTTAGACAACTTATTGGCCTTTTAAGCCCAACGGTCTATCAGGAAGTAGAAGAGCAGAAAC
TACATCAGGCAGCATGCTTGATTCAAGCCTATTGGAAGGGTTTTCAGACAAGAAAGAGATTAAAGAAGCTTCCATATGCT
GTGATTGCTTTGCAGAGGAGTTTCAGATCCAAACGATCAAAGATGTTGCTGGAGATAAATAGGCAGAAGGAAGAAGAGGA
CCTCAAATTACAATTGCAGCTTCAAAGACAGAGAGCCATGAGACTTTCCCGAGAATTGCAGCTGAGTATGCTCGAAATAG
TTCATCCAGGTCAGGTGGAGAAACTCTATCGGGAAATGGAAGAGAAATCAGCATTGATTATCCAGAAACATTGGAGAGGG
TACAGGGAAAGGAAAAATTTTCACCAACAGAGGCAGTCTCTCATAGAGTATAAAGCAGCTGTCACACTTCAAAGAGCAGC
ACTTAAATTCCTAGCGAAGTGCCGTAAGAAAAAGAAACTATTTGCTCCTTGGCGAGGACTCCAAGAACTCACTGATGCAC
ACCGAGTTGAACTGAAGAAACAAGTGGATGACTATGTCAGAAGACATTTGGGCTCTCCAATGTCAGATGTGGTCAGTAGG
GAGCTCCATGCCCAAGCTCAAGAACGACTGCAACACTACTTTATGGGCAGGGCCCTAGAAGAGCGAGCCCAGCAGCACAG
AGAAGCTCTGATGGTACAGATCAGCACCAACGTTGAACAGCTAATGAAGGCACCAAGTCTGAAGGAGGCAGAAGGGAAAG
AACCTGAGCTCTTCCTAAGTAGATCCAGGCCTGTGGCAGCCAAGGCCAAGCAGGCCCATCTCACAGCCCTGAAGCACATA
CAAGCACCCTGGTGGAAGAAGCTTGGAGAAGAATCTGGAGATGAGATTGATGTTCCAAAGGATGAGCTTAGTATAGAATT
AGAAACTTTATTCATTGGTGGAACCAAACCACCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .54 RPM |
| SRP007412_cerebellum | 9 .24 RPM |
| SRP007412_heart | 3 .19 RPM |
| SRP007412_kidney | 4 .34 RPM |
| SRP007412_liver | 2 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000173226 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028124 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004271 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015281 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2845 | 87.40 | 85.95 | Please wait, loading  |
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Download FASTA sequences of all ENSPPYG00000013494 retrocopies