Parental gene:

NAB1, ENSPPYG00000013025

Aliases:None
Description:NGFI-A-binding protein 1 [Source:RefSeq peptide;Acc:NP_001127431]
Organism:Orangutan (Pongo abelii)
Coordinates:2b:81439389..81473204(+)


>ENSPPYG00000013025
ATGGCTGCGGCCTTACCCAGGACCTTGGGGGAGTTGCAGCTGTATAGAATATTACAAAAAGCCAATCTACTTTCTTATTT
TGATGCCTTTATCCAACAAGGTGGTGATGATGTCCAGCAACTCTGTGAAGCAGGAGAAGAGGAGTTTTTGGAAATCATGG
CACTCGTGGGCATGGCTAGCAAGCCCCTTCATGTTAGAAGGCTGCAGAAGGCTTTGAGAGACTGGGTCACAAACCCTGGG
CTTTTCAATCAGCCACTGACTTCCCTTCCTGTCAGTAGCATACCCATCTATAAATTACCAGAGGGATCACCAACATGGCT
GGGAATATCCTGCAGTAGTTACGAAAGGAGTAGCAATGCCCGGGAACCTCATTTAAAAATCCCCAAATGTGCTGCCACCA
CCTGTGTGCAGAGCCTGGGACAGGGGAAGTCAGATGTGGTCGGGAGCCTAGCACTGCAGAGTGTTGGTGAGTCCAGACTC
TGGCAAGGCCACCATGCCACTGAGAGCGAGCACAGCCTCTCCCCAGCAGACCTGGGCTCCCCCGCGTCCCCAAAGGAGAG
CAGCGAGGCGCTGGATGCTGCTGCTGCGCTCTCTGTGGCCGAGTGTGTGGAGCGGATGGCCCCCACACTGCCAAAAAGTG
ACTTGAACGAAGTGAAAGAGCTGCTAAAAACCAACAAGAAGTTGGCCAAAATGATTGGTCACATCTTTGAGATGAACGAT
GATGATCCACACAAAGAGGAGGAAATTCGGAAATACAGTGCAATATATGGCAGATTTGACTCAAAGAGGAAGGATGGGAA
ACATCTCACGCTTCATGAGCTCACTGTTAATGAAGCGGCTGCTCAACTCTGTGTGAAGGATAATGCCCTGCTGACAAGAA
GAGATGAGCTTTTTGCCTTGGCTCGACAGATTTCTCGAGAAGTCACCTATAAATATACTTACAGAACCACCAAGTCAAAA
TGTGGAGAAAGAGATGAATTATCCCCAAAGAGAATTAAAGTGGAGGATGGGTTTCCAGATTTCCAGGAGTCTGTGCAAAC
GCTCTTCCAGCAGGCTAGAGCTAAGAGTGAAGAACTTGCAGCTCTTAGTTCACAGCAGCCTGAAAAGGTGATGGCAAAGC
AGATGGAGTTCCTTTGCAACCAAGCTGGCTATGAGAGACTGCAGCATGCCGAGAGGAGGTTGTCTGCAGGGCTTTACAGG
CAGAGCTCAGAAGAGCACAGTCCTAACGGCTTGACTTCCGATAACTCAGATGGACAAGGAGAAAGACCTTTGAATCTCCG
AATGCCTAATTTACAGAACAGACAACCCCATCATTTTGTGGACGGGGAGCTGAGCAGACTTTACCCCAGTGAGGCAAAGT
CCCACTCATCAGAGAGCCTTGGGATTTTAAAAGACTACCCTCATTCAGCTTTTACCTTAGAAAAGAAAGTCATCAAAACA
GAGCCTGAAGATTCAAGATAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 12 .22 RPM
SRP007412_cerebellum 59 .83 RPM
SRP007412_heart 12 .04 RPM
SRP007412_kidney 21 .58 RPM
SRP007412_liver 11 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010241 ortholog_one2one 1 retrogene
retro_chof_2490,
Callithrix jacchus ENSCJAG00000005748 ortholog_one2one 1 retrogene
retro_cjac_4224,
Gorilla gorilla ENSGGOG00000013842 ortholog_one2one 1 retrogene
retro_ggor_3068,
Microcebus murinus ENSMICG00000007306 ortholog_one2one 2 retrogenes
retro_mmur_1155, retro_mmur_1211,
Nomascus leucogenys ENSNLEG00000006665 ortholog_one2one 1 retrogene
retro_nleu_2288,
Ictidomys tridecemlineatus ENSSTOG00000000098 ortholog_one2one 1 retrogene
retro_itri_1621,
Tupaia belangeri ENSTBEG00000011954 ortholog_one2one 1 retrogene
retro_tbel_3626,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3822 91.81 72.43
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Download FASTA sequences of all ENSPPYG00000013025 retrocopies